Haloquadratum walsbyi C23: Hqrw_3120
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Entry
Hqrw_3120 CDS
T01942
Symbol
cbf5
Name
(GenBank) tRNA/rRNA pseudouridine synthase Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hwc
Haloquadratum walsbyi C23
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hwc03016
]
Hqrw_3120 (cbf5)
Enzymes [BR:
hwc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hqrw_3120 (cbf5)
Transfer RNA biogenesis [BR:
hwc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hqrw_3120 (cbf5)
Prokaryotic type
Hqrw_3120 (cbf5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Pus10_C
PUA
Motif
Other DBs
NCBI-ProteinID:
CCC40906
UniProt:
G0LJH2
LinkDB
All DBs
Position
complement(2146903..2147922)
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AA seq
339 aa
AA seq
DB search
MTESPRLRESPDNRSLADICNFGVVNLDKPVGPSAHQVSAWVRDLIGVERAAHAGTLDPK
VTGCLPILLGEATRLAPVFLEGIKEYLAVLEFHGPPPSDLSMIIETFEGTIYQKPPRKSA
VSRRLRKRTIETLDILEVDSDAQQALLHIRCESGTYIRKLCHDLGLAAGTGAHMGDLRRT
GTTPFSDTNLISTADLTDAVVFTLEEIARANQTQINDAPDDSTAAYSLLHKINTANIDPN
STSPTDHLRNVISPAERALQHLPTVIIAPSAAAEVAMGAPVYAPGVIEFDSAAGNTHDIT
DSALVSCHTPDETAVCLGRVSGPLDAESGEVISLERVLV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcaccacgacttcgtgaatcaccagataatcgctcactcgccgacatttgt
aactttggggtagtgaatctagataaacccgttggaccatcggctcatcaggtctcagcg
tgggttcgtgatctcattggtgttgagcgcgctgcgcatgctggaacccttgatccgaag
gtaactggttgtcttccgattctccttggtgaggcaacacgacttgctccagtatttctc
gagggaatcaaagaatatctggcagtgttggagtttcatggacctcccccaagtgacctt
tcgatgattattgagacatttgagggaacaatctatcagaagccgccacggaagagtgct
gtttcacgccgtcttcgaaaacgaacaattgaaacacttgatatcctcgaggttgattcg
gatgctcaacaagcgctcctccatattcgctgtgagagcggcacttacattcgaaagctg
tgtcatgacctcggacttgcggctgggacaggcgcgcacatgggcgaccttcggcgcaca
gggacaacaccattctctgacacaaatctgatttcaactgctgacctcacagatgctgtt
gtattcacgcttgaggagatagccagagctaatcaaacgcaaatcaatgacgctccagat
gactcaaccgctgcgtattcgctacttcacaagattaataccgcaaacatagatcccaac
tcaacctcgccgacggaccaccttcgtaatgttatcagtcctgcagagcgtgcacttcag
catcttccgacagtcataattgccccatctgcagccgcggaggtggcaatgggagcaccg
gtgtacgcaccaggcgtgattgaatttgattctgcagcgggaaacactcatgacattact
gatagtgcccttgttagctgtcatactccggatgagactgctgtctgccttggtcgcgtc
agcggtccacttgatgccgagagtggcgaagtcatctcattagagcgagtgcttgtctaa
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