Haloquadratum walsbyi C23: Hqrw_3801
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Entry
Hqrw_3801 CDS
T01942
Symbol
arf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Hqrw_3801 (arf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hwc03019
]
Hqrw_3801 (arf1)
03012 Translation factors [BR:
hwc03012
]
Hqrw_3801 (arf1)
Messenger RNA biogenesis [BR:
hwc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Hqrw_3801 (arf1)
Translation factors [BR:
hwc03012
]
Eukaryotic type
Release factors
Hqrw_3801 (arf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Zn_ribbon_8
DUF7562
Motif
Other DBs
NCBI-ProteinID:
CCC41535
UniProt:
G0LN65
LinkDB
All DBs
Position
2783649..2784899
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AA seq
416 aa
AA seq
DB search
MSTDAEDVSNDRRKYEFRKVIEELREYEGSGTQLVTIYIPPDRQVSDVVAHITQEHSEAS
NIKSKQTRTNVQDALTSIKDRLRYYDTYPPDNGIVLFSGAVSTGGGQTTMVTRSLESPPE
PVQSFRYHCDSDFLTDPLEDMLADKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVPKRHEIDGVLVGGPSPTKDEFLDG
DYLHHELGDVVVGKFDVSYTDESGLHDLVDSAQDVLADQEVMKDKAEMEEFFEKLHGGEE
ATYGFEPTRKNLMMGAVDRLLLSEDLRSDVVVYECPDGHEEYEVIDRRHDDPEHTCSDCG
SASEKTEREDVIEYLMSIAEQRGTETKFISTDFEKGEQLHNAFGGIAGILRYATGI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgacgccgaagacgtgagcaacgaccgccgtaaatacgagttccgaaaagtt
attgaggaacttagagagtacgaggggtctggtacgcaactcgttactatctatatccca
cctgatagacaggtctctgatgttgttgctcacatcacacaagaacactcggaggcgtca
aatattaagtcaaaacaaacacggacaaacgtccaagacgcactcacttcaattaaagat
cgactccgatattacgatacatatccgccagacaatggtattgtcctcttttctggcgct
gttagcacaggtggcggacaaacgacgatggtaacgcgatcgcttgaaagtccacctgag
ccagtccaatcgttcagatatcattgtgactccgactttctcacagacccacttgaagac
atgctcgcagataagggtctgttcgggctgattgtccttgaccgtcgagaggcaaatgta
ggatggttaaaaggaaaacgtgttgagccagttaaatcagcatcttcgcttgttccaggg
aagcaacgaaaaggtggtcagtctgcacaacggtttgcccgacttcgacttgaggcaatc
gataatttctatcaagaagtcgccgggatggcaaatgacctgtttgtgcccaagcgacac
gagatagatggtgtgctggttggtggtccctcaccaacgaaggatgaattccttgatggg
gattatctgcatcatgaacttggagatgttgttgtcggaaaattcgatgtttcatataca
gatgaatcgggtttacacgatcttgttgactctgcccaagatgtccttgctgatcaggag
gtaatgaaagataaagccgaaatggaagagttctttgagaagctccatggcggtgaggaa
gcaacatatgggtttgaaccgacgcgaaagaatctaatgatgggtgccgttgaccgactc
ttactctctgaggatcttcggtctgatgttgttgtgtatgagtgccccgatggtcatgag
gagtacgaagttattgatcgtcgacatgatgatcctgagcatacttgtagtgactgtgga
agtgcatctgagaagaccgaacgcgaggatgtcatcgaatatctaatgagtattgctgaa
caacgcggaaccgagacaaagttcatctcgactgactttgagaagggtgagcaattacac
aatgcgtttggtggtattgctgggattctccgatatgcgaccggaatataa
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