Haloquadratum walsbyi C23: Hqrw_3921
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Entry
Hqrw_3921 CDS
T01942
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hqrw_3921 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwc03021
]
Hqrw_3921 (rpoB1)
Enzymes [BR:
hwc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hqrw_3921 (rpoB1)
Transcription machinery [BR:
hwc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hqrw_3921 (rpoB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
CCC41654
UniProt:
G0LF91
LinkDB
All DBs
Position
complement(2912678..2914513)
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AA seq
611 aa
AA seq
DB search
MAQTPKQREAKVYVNGSLVGTHESPETLADNIREARRRGEVSDMVNVSVKERTREVIINA
DAGRARRPLIVVEDGNPRLGDNEIDAVKSGDLSFEDLVNRGYIEFIDAEEEEDIYVAVDE
NELEEAHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPAANYRIRPDT
RQHLLHYPQLSMVKTQTTEQIGFDERPAAQNFVVAVMSYEGFNIEDALVMNQGSVDRAMA
RSHFFRTYEGEERRYPGGQEDRFEIPSQDVRGARGENAYTHLDEDGLVNPETRVDENSVL
LGKTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGVVDTVTLMEGEDGSKLAKVSVRD
QRVPELGDKFASRHGQKGVVGHLAPQEDMPFTEEGVVPDLVLNPHALPSRMTVGHVLEML
GGKVGSLQGRRVDGTAFQGEDEEDLREGLEEYGFNSSGKEVMYSGITGEKIDAEIFVGTI
FYHKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRLGEMERDTVIGHGAAMVLQER
LLDSSDKEEVYVSADTGMVAVEDRGQRRIYDPVTGDEDDIHEIEISYAFKLLLDEMIALG
IRPRLDLQDAV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccccaaaacaacgagaagcaaaagtatacgtcaacggtagtcttgtcgga
acgcatgaaagtcctgagacacttgcagacaatattcgcgaagcacgtcgtcgtggtgaa
gttagcgacatggtcaatgtctcagtgaaagagcggactcgcgaggtcattataaacgca
gatgctggtcgtgcacgacgaccactgattgttgttgaagatggcaatccgcgtctcggc
gataacgagatcgatgcggtcaaaagcggcgatctgagctttgaagatctcgttaatcgc
ggatatattgaatttatcgacgctgaggaggaagaagacatctacgttgccgttgatgaa
aatgaattagaggaagcacacacgcatcttgagattgacccacagctcatcttcggcatt
ggtgctggaatgattccatatcccgagcacaatgcttcgccgcggattacgatgggtgca
gggatgatgaaacaatcgctcggactcccggctgcgaattaccgcatccgccctgataca
cgacagcatctcttacattatccgcagttgtcaatggtgaagacccagacaacagaacaa
attggctttgacgaacgaccagcagcacagaacttcgtggttgcggtcatgtcatatgaa
ggattcaatattgaggatgcgcttgtaatgaatcaaggttctgtcgaccgcgcgatggct
cgttcgcacttcttcagaacatatgagggtgaggagcgacggtaccctggtggacaagaa
gaccgatttgagattccaagccaagatgttcgtggcgcacgcggcgagaatgcatataca
cacctcgatgaggatggattggttaatcctgaaacgcgtgttgatgaaaactcagtgctt
ctcggtaagacatctccacctcggtttcttgaagagcccgacgacatgggcggactctct
ccgcaaaaacgacgcgagacatcagtcacgatgcgctctggtgagtctggtgttgttgac
acggtcacactgatggaaggcgaagatgggtccaaacttgcaaaagtatcagtccgcgat
cagcgcgttcctgagttaggtgataagtttgcatcacgacatggacaaaagggcgttgtc
ggtcatcttgcaccacaagaggacatgccgttcaccgaagagggcgttgttcccgatctc
gtcctcaatccacatgcgctcccttcgcgaatgacagttgggcacgttcttgagatgctt
ggcggaaaggtcggatcgcttcaaggacgtcgtgtcgatggaacagccttccagggagaa
gatgaagaagacctccgagagggacttgaggaatacggatttaattcctccggaaaagag
gtcatgtattccggcattaccggtgagaagatcgatgcggagattttcgttgggacaatc
ttctatcataagctgtatcatatggtaagtaacaagctccatgcgcgatcgcgtggtcca
gtacaagtgcttacccgccagccaactgaaggacgtgctcgcgaaggtggacttcggctt
ggtgaaatggaacgtgacacagtgattggtcatggggcagcaatggtattgcaggaacgt
cttctcgattcatcagataaagaagaggtctatgtatccgcggataccggaatggttgcc
gttgaggaccgtggtcaacgacggatatacgatcctgttacaggcgatgaagatgatatt
catgaaattgagattagctatgcattcaaactactcttagatgaaatgattgctcttggc
atcagaccgcgacttgatctccaagatgcagtataa
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