Haloquadratum walsbyi C23: Hqrw_4067
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Entry
Hqrw_4067 CDS
T01942
Symbol
tfbA8
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hqrw_4067 (tfbA8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwc03021
]
Hqrw_4067 (tfbA8)
Transcription machinery [BR:
hwc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Hqrw_4067 (tfbA8)
Prokaryotic type
Archaeal type
TFB
Hqrw_4067 (tfbA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
Cyclin_C
UNC45-central
DUF7437
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CCC41793
UniProt:
G0LFN0
LinkDB
All DBs
Position
3047045..3047989
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AA seq
314 aa
AA seq
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MSDAPVIKTEAKRKSTADISLTTDTPVSCPECGGHPENTGEETICGDCGLVLSEYRIDHG
PEWRSFADDTTNPKRTGAPLTRSRHDRGLSTEIGRSIRLTGRKRRQFARLRRQHNRARIS
TKRERNQVYAFTEIRRLTGALSLPKQIRDDACSLFRSAQSEDLLRGRSLEGFAAACVYAA
CRVAGVARTIEEITDIAKATSAEQRAAYTALNRELGLPIGPIDPAQYLPRFASELELPSD
IERRACEYISMITAQGIGAGRNPSGVAAACLYTAARDIGFELTQQTAADIADVTPVTLRA
TYHDLREVTLPATE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgcacccgttatcaagaccgaagcaaagcgtaaatctactgctgatatttct
ctcacaacagatacaccggtatcgtgtcctgagtgtggcggacatcctgaaaatacgggc
gaggagactatttgtggagactgtgggttggtattatcagaatatcgtattgaccatgga
cctgaatggcggtccttcgcggacgacacaacaaatccaaagcgaactggcgcaccgctg
acccggtcccgacatgatcgtgggctctcaactgaaattggtcgctcaattcgtcttact
gggcgtaaacgacggcagtttgctcgcctccgtcgtcaacataatcgcgctcgtatctca
acaaaacgtgagcgtaaccaggtatatgcatttactgagattcgacgactcacaggcgcg
ctttcactcccgaagcagattcgagatgatgcatgttcgctgtttcgatctgcacaatca
gaggacttacttagaggtcgttcgcttgagggcttcgctgctgcttgtgtgtatgctgcc
tgtcgagttgccggggttgctcggacaatcgaagagatcactgacattgcaaaagcgaca
tctgccgaacaacgtgctgcgtacaccgcactcaatcgtgaacttggacttccaattgga
ccgattgatccggcacagtatctcccccggtttgcctctgaattagaacttccatccgat
attgagcgccgcgcttgtgaatacatctcaatgataacagcacaagggattggtgctggg
cgaaatccaagtggtgttgccgctgcttgtctatatactgctgctcgtgacattgggttt
gaactaacacagcagacagcagcagatattgcggatgtcacaccggtcacactacgtgcg
acatatcatgatctccgtgaggtgacgctgccggcaacagaataa
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