Haloquadratum walsbyi C23: Hqrw_4140
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Entry
Hqrw_4140 CDS
T01942
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hqrw_4140 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwc03400
]
Hqrw_4140 (uvrB)
DNA repair and recombination proteins [BR:
hwc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hqrw_4140 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Hqrw_4140 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
UB2H
Myb_DNA-bind_7
HEM4
AAA_30
DUF87
Motif
Other DBs
NCBI-ProteinID:
CCC41863
UniProt:
G0LFV0
LinkDB
All DBs
Position
complement(3133892..3135994)
Genome browser
AA seq
700 aa
AA seq
DB search
MSNTSKSGPLSPDRPAVDRDFRVDAPFDPAGDQPDAINSLASGFDAGMTEQTLLGVTGSG
KTNTVSWVVEEIQRPTLVIAHNKTLAAQLYEEFRELFPDNAVEYFVSYYDYYQPEAYVEQ
TDTYIDKDLSINEEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPANYTDMALRFEVG
SQINRDELLAQLVDLNYERNDVDFQQGTFRVRGDTVEVYPMYGRYAVRIEFWGDEIDRLS
KLDPLTGNVVSEEPAVLVHPAEHYSIPEAKLESAIDEIETLMTDRIQYFERQGDLVAAQR
IEERTTFDIEMLRETGYCSGIENYSVHMSDRDSGDPPHTLLDYFPDDFLTVVDESHQTLP
QIRGQFAGDKSRKDSLVKNGFRLPTAYDNRPLTFEEFQKKTGTRLYVSATPGTYEREHSE
QVVEQIVRPTHLIDPAIEVADATGQVDDLLNRINKRVERDERVLVTTLTKRMSEDLTEFL
EEAGVDVAYMHDETDTLERHELIRDLRLGTIDVLVGINLLREGLDIPEVSLVAILDADQE
GFLRSETTLVQTMGRAARNVEGEVILYADEITDSMSAAIDETRRRRQIQRKYNEEHGYDP
QTIQKAIGETNLPGSDDDSTTRTTETPVDKQEARIQIETLEERMESAVSDLEFELAADIR
DQIRDIQREFGLDHNEAEDGANGVNPGQDPLASPSSTDSN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatacatccaaatcggggccgctctcgcctgatcgaccggcggttgatcgtgat
ttccgcgttgacgcgccttttgacccagcgggagatcagccggatgcaattaattcgctt
gcgtcaggatttgacgctgggatgactgagcagacgttattgggtgttacaggctctgga
aagacaaataccgtttcgtgggttgtcgaagaaatacagcgaccaacgcttgttattgca
cataataagacgttagcagcacaactgtatgaagagtttcgtgagttgtttccggataat
gcagtcgaatattttgtttcatactatgattattatcagccagaggcatatgtcgaacaa
acggacacgtatattgataaagacctctcaataaacgaagaaattgaccgacttcgtcac
tcagcaactcgttcactcctcacgcgtgatgatgtcattgttgttgcttcggtttctgct
atctatgggctcggtgacccggcaaactacaccgatatggctctcagatttgaggtaggt
agtcaaatcaatcgagatgaacttcttgcacaacttgttgacctgaattatgaacgcaat
gatgtcgacttccaacaggggacatttcgcgttcgtggtgatactgttgaggtatatcca
atgtacggtcggtatgccgtccggattgagttctggggtgatgagatcgaccgattgtca
aaacttgacccgcttactggcaatgttgtctctgaggaaccagcagtgcttgtccatcct
gcagagcattactcgattccggaggcaaaactcgaatcggctatcgatgagattgaaaca
ttgatgaccgaccgaatccaatactttgaacgtcagggtgaccttgtggcagcacagcga
attgaagagcgcacaacatttgatatagagatgctccgagaaacgggatactgctcggga
attgagaattactcagtgcatatgtctgatcgagattcaggcgacccgccccatacatta
ttagattacttccccgatgattttttgactgttgttgatgagtcacatcagacactccca
caaatccgaggacaatttgcaggcgataaatctcgaaaagattctcttgtaaaaaacgga
tttcgtcttccaacagcatacgataaccgcccactcaccttcgaagagtttcagaaaaaa
actgggacccgattatatgtctcagcaacgcctgggacatacgagcgcgagcactctgaa
caagtagttgagcaaattgtccgaccaacacacctgattgatcctgcaattgaggttgcg
gatgcaactgggcaggttgatgatctgctcaatcgaattaacaagcgtgttgagcgcgat
gaacgagtccttgttacgacgctcacaaaacgaatgtctgaggacttgactgagtttctt
gaagaggcgggtgttgatgtggcatatatgcatgatgagacggatacgcttgaacgacat
gaactcattcgtgaccttcgactgggtacaattgatgtccttgttggaattaatcttctt
cgtgaaggacttgatatccccgaagtatcacttgtcgccattcttgatgctgatcaagaa
gggttccttcgatctgaaactacacttgttcagacaatgggccgtgcagcgcgtaacgtc
gaaggtgaagtcattctttatgcagatgaaatcacagactcaatgtcagcagcaatagat
gagactcggcgacgccgtcagatccagcgtaaatataatgaagagcatgggtatgaccca
caaacgattcaaaaagcaatcggtgagacgaatcttccaggaagtgatgatgactctacg
acaagaacgaccgagaccccggttgataaacaggaagcgcgcatacagattgaaacgcta
gaggaacgaatggagtcagccgtatcagatcttgaatttgaattagccgctgatattcgg
gatcagatccgtgacatccaacgtgaattcggattagatcataatgaggctgaggatgga
gccaatggagttaatcctggtcaagacccacttgcatcaccctcatctaccgatagtaat
tga
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