Helicobacter winghamensis: A0Z60_01105
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Entry
A0Z60_01105 CDS
T07030
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hwi
Helicobacter winghamensis
Pathway
hwi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0Z60_01105 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwi03400
]
A0Z60_01105 (uvrB)
DNA repair and recombination proteins [BR:
hwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0Z60_01105 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A0Z60_01105 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
T2SSE
UB2H
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QOQ98227
LinkDB
All DBs
Position
214851..216827
Genome browser
AA seq
658 aa
AA seq
DB search
MFALHSQFKPSGDQPEAIKTLSSFIKKGSQYQTLIGVTGSGKTFSMAHIIQELQMPTLIM
THNKTLAAQLYSEFKGFFPKNHVEYFISHFDYYQPEAYIPRQDLFIEKDSSINEELERLR
LSATTSLLAYDDCVVVASVSANYGLGNPKEYLEMIEKFEVAQDYHQKSLLLRLVDMGYKR
NDNFFDRGDFRVNGEVIDIFPAYSEEEIVRLEFFGDELESITLLDSIEKKPLKKLESFVL
YAANPFIVGADRLKQAVKSIEEELHLRLKFFKEQGRMVEYERLKSRTEFDLEMIQATGIC
KGIENYARHLTGKKPRETPYSLLDYFAQKNQPYLLIVDESHVSLPQFGGMYAGDRSRKEV
LVEYGFRLPSALDNRPLKYEEFIIKAPHFLFVSATPAQKELDLSQEHTAEQLIRPTGLLD
PLYEVLEVDKQVAILYDRAKEVIARGERVLVTALTKKMAEELTKYYNDLGLRVRYMHSDI
DAIERNQIIRALRAGEFDILVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTMG
RAARNVNGRVLLFASKITPSMQKAMEITDYRRAKQEAYNKAHNIIPQSVSRKLDEDLKNQ
DLGMLYERAKKASKEKMPKSEREKLVKELSKQMQEAAKKLEFEEAARLRDEIAKLRAL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctttgcactcacaatttaagccatcaggcgaccagccagaagccattaaaaca
cttagttcttttattaaaaaaggcagtcaataccaaacgctaattggcgttacaggcagt
ggtaaaactttttcaatggcacatatcatacaagaattacaaatgccaactttgattatg
acgcataacaaaactcttgctgcgcagctttatagcgagtttaaaggcttctttccaaaa
aatcatgtggaatatttcatttctcactttgattattatcagccagaagcctatattcca
agacaagatttatttattgaaaaggattctagtattaatgaagagctagagcgattgcgc
ttaagcgcgacaacttcgcttttggcttatgatgattgcgtggttgtggcaagcgtttcg
gcaaattatggtttaggaaatcctaaagaatatttagaaatgattgaaaagtttgaagtg
gcacaagattaccatcaaaaatctttgcttttacgccttgtggatatgggctataagcgt
aatgataatttttttgataggggggattttagagttaatggggaagtgattgatattttt
ccagcatatagtgaagaagagattgtgcgtttggagttttttggtgatgaattagaatct
attacgcttttagattccatagagaaaaagccacttaaaaagttagaatcctttgtgctt
tatgcggcaaatccttttattgtgggggcagataggttaaaacaggcagttaaaagcatt
gaagaagagttgcatttgcgcttaaagttttttaaagaacaaggtagaatggtagaatat
gagcggttaaaatcacgcacagaatttgacttagaaatgatacaagcaacagggatttgt
aaggggattgaaaactacgcaaggcatttaacaggtaaaaagcccagggaaacgccttat
tctttgttagattattttgcgcaaaaaaatcaaccttatttgttaattgttgatgaaagc
catgttagcttgccacaatttggaggaatgtatgcaggcgatagaagtcgcaaggaagtg
cttgtggaatatggattccgcctgcctagcgctttggataatcgtccgctaaaatatgag
gagtttatcataaaagcaccgcattttctttttgtttctgcaacacctgcacaaaaagag
ctagacttaagccaagaacatacagcagagcagttaatccgtccaacaggtttgctagat
cctttgtatgaagtgttagaagtggataagcaagttgcaattctttatgatagggcaaaa
gaagtgattgcaaggggagagagagtgcttgtaactgcgctcactaaaaaaatggcagaa
gagctaacgaaatactacaatgatttaggtttaagggtgcgttatatgcactctgatatt
gatgccattgagcgcaatcaaatcattcgcgctttaagagcaggggagtttgatatttta
gtgggaatcaatcttttgcgcgagggcttggatttaccggaagtgtccttggttgcgatt
ttagatgcagataaagaagggtttttaagaagcgaaacaagtctcattcaaacaatgggg
cgtgctgctagaaatgtcaatggacgcgtgctgctttttgcttctaaaattacgccttct
atgcaaaaggctatggaaattacagattatcgtagagccaagcaagaagcttataataaa
gcccataacatcataccgcagagtgtttcaagaaaacttgatgaagacttaaaaaatcaa
gatttaggaatgctttatgaaagggcaaaaaaagcaagtaaggaaaaaatgccaaaaagc
gaaagggaaaagcttgttaaagaattaagcaagcaaatgcaagaagccgctaaaaagcta
gagtttgaagaggcggcaaggttgcgcgatgagattgcaaaactgcgcgcattataa
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