Helicobacter winghamensis: A0Z60_02500
Help
Entry
A0Z60_02500 CDS
T07030
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hwi
Helicobacter winghamensis
Pathway
hwi03420
Nucleotide excision repair
hwi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0Z60_02500
03430 Mismatch repair
A0Z60_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwi03400
]
A0Z60_02500
Enzymes [BR:
hwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0Z60_02500
DNA repair and recombination proteins [BR:
hwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0Z60_02500
MMR (mismatch excision repair)
Other MMR factors
A0Z60_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOQ98462
LinkDB
All DBs
Position
complement(497669..499708)
Genome browser
AA seq
679 aa
AA seq
DB search
MPLSNLNPQQKEACQAPSGHNLVIASAGTGKTSTIVGRISFLLQNGILPNEILLLTFTNK
AASEMLSRLSTKFDAKIVKTIEAGTFHAVAYRFLKAKDSIVLKQPRELKVLFKSLYDKRI
FLNASETTPYSANYLYDLFSLYFNATITENFTDWLERKNPQQLEYVEIYLDVWEEFKTLK
QEYRYVDYNDLLLNYKTSLLQNTQSPLFKEVLVDEYQDTNPLQDSILQALNPPSLFCVGD
YDQSIYAFNGADISIIGSFKERYTNGKIFSLTKNYRSTEPILNLANRVIEKNPRIYPKKL
EVVKDKNFGNPALLVYDELFLQYAGIANKIKLSNRPYSEIAVIFRNNSSADGIEASLREL
GIPSKRKGGVSFFDSKEVVYMLNLCTLLFNPKDMMAFIHTLSHAKGIGNAVAKDIYEALI
LLGNGDLRQGILHPDKTIKEPYKKGIQNTQLGLFDDFLEFNNTARFHTLPLENDFKSNAI
LSHPKITKDGAEFLNALYCFFKFFNAYDKPYNLIAKTQALPIFQIVAQKLAKERAITKEG
VILEEKRLEALEKINRKISLLRDLATHYEDIGRFLNAMILGSSEMSEGEGVHLLSIHASK
GLEFGEVYIVDLMEGRFPNKKLMQQGGSLEEERRLFYVAVTRAKENLYLSYAKKDILKNI
HYEGSIFLYEAGLLNKRLT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
ttgcccttatcaaatctcaacccccaacaaaaagaagcttgccaagctccaagcgggcat
aatctagttatagcttcagctggtactggcaagacttccacaatagttggaagaatctct
tttttacttcaaaatggaatcttacctaatgagattttactcttaacttttaccaataaa
gccgcttcggaaatgctctcacgccttagcacaaagtttgatgcaaaaatcgtcaaaacc
attgaagcaggcacttttcatgctgttgcttatcggtttttaaaggctaaggattccata
gttttaaaacaaccacgagagctcaaagtgctttttaaaagcctttatgataaacgaatt
tttttgaatgcttcagagaccactccttatagtgcaaactatttatatgatttattttca
ctttattttaatgcgacgattaccgagaatttcacagactggctagaacgcaaaaatccc
caacaactagaatatgtagagatttatttagatgtttgggaagaatttaagactttaaag
caagaataccgctatgtagattacaatgatttactgctaaattacaaaacaagcttattg
caaaatacacaatcccctttatttaaagaagttttagttgatgaatatcaagataccaat
cccttgcaagattccattttacaggctttaaacccgccttcactcttttgcgttggcgat
tatgatcagagtatttatgcttttaatggagcagatattagtatcataggaagctttaaa
gagcgctacacaaatggtaaaatctttagtctaactaaaaattaccgctccacagagcca
attttaaaccttgcaaaccgcgtgattgaaaaaaatccacgcatttaccccaaaaaactt
gaagtggttaaagataaaaacttcggcaatccagcacttctagtttatgatgaactcttt
ttgcaatacgctggaattgcaaacaaaatcaaactctcaaaccgcccttatagtgaaatt
gctgtgatttttagaaacaactcaagtgccgatggtattgaagctagcctaagagagctt
ggaattccatctaagcgtaaaggtggcgtaagcttttttgattctaaagaagttgtgtat
atgttaaacctttgcaccttgctttttaatccaaaggatatgatggcatttatccacact
ctaagccacgcaaaaggaatcggaaatgccgttgctaaagatatttatgaagctttgatt
cttttaggaaatggggatttaaggcaggggattttacaccctgataaaacaatcaaagaa
ccctataaaaaaggaatccaaaacacacaattaggactctttgatgattttttagagttt
aacaacacagcacgattccacacattgcctttagaaaacgactttaaaagcaatgctatt
ttaagccatccaaagatcaccaaagatggagcagagtttttaaacgccttatattgtttt
tttaaatttttcaatgcctatgataaaccttataatcttattgcaaaaactcaagcgctc
cccatttttcaaattgttgcccaaaagcttgcaaaagaaagagcaattacaaaagaaggc
gtaattctagaagaaaaacgcctagaagccctagaaaaaatcaatcgcaaaatatcactc
ttaagagacttagccacacattatgaagacatcggacgctttttaaatgcaatgattcta
ggttctagcgagatgagcgaaggagaaggtgtgcatctccttagcattcacgccagcaaa
ggactagagtttggcgaagtgtatattgtagatttaatggaaggtagattccctaataaa
aagctaatgcagcaaggtgggagcctagaggaagagcgcagactcttttatgtggcagta
acccgtgctaaagaaaatctctatctaagttatgccaagaaagatattctaaaaaacatt
cactatgaaggctctatttttctttatgaagctggactcttaaacaagcgtttaacttaa
DBGET
integrated database retrieval system
