Helicobacter winghamensis: A0Z60_03260
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Entry
A0Z60_03260 CDS
T07030
Name
(GenBank) type IA DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hwi
Helicobacter winghamensis
Brite
KEGG Orthology (KO) [BR:
hwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hwi03032
]
A0Z60_03260
03400 DNA repair and recombination proteins [BR:
hwi03400
]
A0Z60_03260
Enzymes [BR:
hwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A0Z60_03260
DNA replication proteins [BR:
hwi03032
]
Prokaryotic type
DNA Topoisomerases
A0Z60_03260
DNA repair and recombination proteins [BR:
hwi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A0Z60_03260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QOQ98604
LinkDB
All DBs
Position
649712..651676
Genome browser
AA seq
654 aa
AA seq
DB search
MQNTIIIIESPNKIEKIKKITGAEVYATKGHFKRLKKDFLEDYKNYNPIFEYKDENTKKS
MNYIFSKCKGKEVIIATDPDREGYGIGYMVYEVIKNVANSVKRAEFFEITENGITKGLQN
AIPFSQSNLKMYDSFKARLVGDKMIGFILSPKYAQILKDKKTGVGRVQTPALNFIVKREL
EIQQYNTLPLNQKIDYKISIKSLKDNIEFIIKSENIYNNKEEALKIIENLKSLNTAMCYE
IKLKDSKQSPKAPFRTSQLQEEANKSYKFTSESTMQYAQKLFEKGLITYHRTDSNSLSDE
FLEEVKNKFSQEEWYQMREYKAGKQSQAEAHEAIRITHAHTSGEMQAIINENNLSNEEVK
LYKLIYQNSIASQAKDCIKEIKDYIFNIKGMLFKFTNSKIIYKGFKGIFEDDINTEEKGE
DENSLKIDFNQNDNINLLDYSLVEIKKNQPKRYKESNFISLLEKEGIGRPSTYASFLKTL
LEKECVALDTKGEIAPTQKGFNLIEALMQNNDEWITTSEFTKQMELVLDKIALNELHYLN
FIQPIHEKMNFLEIESNVNMPPSPKQIKFLEDLAKEQGVEIPKVAYENYKECKTLIEKLS
KSNKKPPSEKQIKLAEDLAKKHNLNLPKDYKEYWKSCSDFLDKVFNEAKSNTHK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatacaatcattattattgaatcaccaaacaaaatagaaaaaatcaaaaaaatt
acaggtgctgaagtttatgcaacaaaagggcattttaagagactaaagaaagattttttg
gaagattataaaaattacaatccaatctttgaatataaagatgaaaatactaaaaaatct
atgaattatattttttccaaatgcaaaggcaaagaagtcatcattgccaccgacccagat
agggaggggtatggaataggatatatggtttatgaagttattaaaaatgtagcaaatagc
gttaagagggctgaattttttgaaattactgaaaatggaattacaaagggattacaaaat
gcaatccctttttcacaaagcaacttaaaaatgtatgacagctttaaagcaaggctagta
ggggacaaaatgataggctttatattaagcccaaaatacgcacaaattttaaaggataaa
aaaactggagtagggagggtgcaaacacctgcattaaattttattgtaaaaagggagcta
gaaattcaacaatataatacacttccattaaatcaaaagattgattataaaattagtatc
aaaagcctaaaagataatattgaatttattatcaagagtgaaaatatttataataataaa
gaagaggcattaaagattattgaaaacttaaaatcactaaatacagcaatgtgttatgaa
attaaattgaaagattctaaacaatcacccaaagccccttttagaacttcacaacttcaa
gaagaagccaacaaatcttataaattcacaagtgaatctacaatgcaatatgcccaaaaa
ctctttgaaaaaggactaatcacctaccatagaacagatagtaactctctaagtgatgaa
tttttagaggaagtaaaaaataaattcagtcaagaagaatggtatcaaatgcgagaatac
aaagcagggaaacaaagccaagcagaagcgcacgaagcaattagaattacgcacgcacac
acatcaggggaaatgcaagcaatcatcaatgaaaacaacttaagcaatgaagaggtaaag
ctttataaattaatttatcaaaactctattgcttcacaagcaaaggattgtatcaaagag
attaaagactatatttttaatatcaaaggaatgctttttaaatttacaaattcaaaaatt
atctacaagggatttaagggaatttttgaagatgatataaacacagaagaaaagggggaa
gatgaaaattctctaaaaatagattttaatcaaaatgataatattaatcttttagattac
tctcttgtggaaattaagaaaaatcaaccaaaacgctacaaagaaagcaattttatatcc
ttgttagaaaaagagggaatagggcgaccaagcacttacgcaagctttttgaaaactctc
ttagaaaaagaatgtgttgctttagacacaaaaggagaaattgctcctacacaaaaaggc
tttaatcttatagaagcattaatgcaaaataatgatgaatggataaccactagcgaattt
accaagcaaatggaattagtcttagacaaaatcgccttaaatgaattacactatttaaat
tttattcaacctatacacgagaaaatgaatttcttggaaatagaatctaatgtaaatatg
ccaccaagccctaagcaaataaaatttttagaagatttagcaaaagagcagggcgtagaa
attccaaaagtagcttatgaaaattataaagaatgcaaaacattaatagaaaaacttagc
aaatctaacaaaaaaccaccgagcgaaaaacaaataaagcttgcagaagatttagctaaa
aaacataatttaaatcttccaaaagattacaaagaatattggaaatcgtgttctgatttt
ttggataaagtatttaatgaagcaaaaagtaatactcataaatag
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