Helicobacter winghamensis: A0Z60_03480
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Entry
A0Z60_03480 CDS
T07030
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hwi
Helicobacter winghamensis
Brite
KEGG Orthology (KO) [BR:
hwi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hwi03016
]
A0Z60_03480 (truB)
Enzymes [BR:
hwi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A0Z60_03480 (truB)
Transfer RNA biogenesis [BR:
hwi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A0Z60_03480 (truB)
Prokaryotic type
A0Z60_03480 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
QOQ98825
LinkDB
All DBs
Position
complement(696024..696872)
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AA seq
282 aa
AA seq
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MEMDRIFVAKKPLFITSNGYLSKLKRQYNVKKAGFSGILDPFACGALVVAFGQYTKLFSF
LEKSPKVYKATLWLGLQSDSLDLENVRGVQETKPLEQARVKEALQEFLGEVRFTPPHFSA
KKIQGKKAYQLARSGDLETLKEGLKEQVMEVFKLEFLNYSHPFVSFKASVSEGAYIRSLG
ALIAQKLGCIGGLSYLERISEGRLHFDNEKALDPLEILPFEKIDLRGDLKIKEIIVNGKK
FNPKLLKISENTKYIVQFEDFFSIISSKNENVQYLANRIPLC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
attgaaatggatagaatttttgttgcaaaaaaaccgctttttattacttcaaatggctac
ttaagcaagctaaaacgccaatacaatgttaaaaaagctggctttagtggaatcttagat
ccctttgcttgtggtgctttagttgttgcatttgggcaatatacaaaactttttagcttt
ttggaaaaatctccaaaagtttataaggcaacattgtggctaggcttacagagtgattct
ctagatttagaaaatgtgcgtggagtgcaagaaactaagcctttagagcaagcaagggtt
aaggaagccttgcaagaatttttaggggaggtgcgttttactccaccacattttagtgct
aaaaaaattcagggcaaaaaggcatatcaacttgctagaagtggggatttagaaacatta
aaagaaggcttaaaagaacaggttatggaagtttttaagttagagtttttaaactattcc
cacccctttgttagctttaaagcaagtgtgagtgagggggcttatatccgctcacttggt
gcattaattgctcaaaaattaggttgtattggcgggctaagttatttagagagaataagc
gagggaagattacattttgataatgaaaaggcgttagatccgctagagattttgcctttt
gaaaaaattgatttgcgtggagatttaaaaataaaagagataattgtaaatggtaaaaaa
tttaatccaaaacttcttaaaatttctgaaaatacaaaatatatagtgcaatttgaggat
tttttttctataatttcaagcaaaaatgaaaatgtgcaatatttagcaaataggattcct
ttatgttga
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