Helicobacter winghamensis: A0Z60_04935
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Entry
A0Z60_04935 CDS
T07030
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hwi
Helicobacter winghamensis
Pathway
hwi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hwi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
A0Z60_04935
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hwi01007
]
A0Z60_04935
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hwi03016
]
A0Z60_04935
Enzymes [BR:
hwi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
A0Z60_04935
Amino acid related enzymes [BR:
hwi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
A0Z60_04935
Transfer RNA biogenesis [BR:
hwi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
A0Z60_04935
Prokaryotic type
A0Z60_04935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
QOQ97418
LinkDB
All DBs
Position
complement(982871..985225)
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AA seq
784 aa
AA seq
DB search
MIFTRSILSHILPLKNITSAMMYSTLNKIGLEVESFCAVVAPKRVVVGKILECQKHPDAT
KLNVTQVAISGTEGSYETRQIVCGASNAREGIYVAVALEGAELPGITIKKAMLRGVESCG
MLCSTAELGFPKVNDGIVELDSSIGELVIGKEISEYPVFNDEIYEISITPNRGDCMSLMG
VARDLSVAFDLELKPLNPPKVSDNAPGIGRVLQIVANDKHDASLLFQAMEIKPSALPLCV
NLLLAHNGILENSWLKDALSFSTLFSGVILNAYPQSFCQLDGQKVVLTLKKDERGLESIY
HENEKLSTIGVELCAYESKESLVKEKEFIVLEASYIAPEIIAQKVMETKTKVDPRVFQRT
SRGSCPNLKVGLSVLSGLLLGEEGVLYTDTQGFIEIPPKDPITIDLELMGRIIGVCLEKL
KVINILKGLGFGVEIASDENFIIAEPPLFRHDIVSVQDVAEEIIRFYGIDNVPSAPLVFV
QNHQSDDALREYYFKRKIAQKAIGVGFNEAVHFVFEDREKLQSCGFEVLEDTLDLLNPIT
QDLNTLRSTLLLGLLRAVVHNCNNGFNAVSLFEMGAVYDKKREQRASLGFIQSGLLCEER
YPNAKGIRGGYFGFCDRIARVIGEFSLEPLESKIKLFHSGQCAKVLQNGKEVGVIATLHP
QFASEFGLDGTYLCELDLDLLTEAIPQVQMYSKFQKAQRDLSVVLDKKIPYYEIRKCIES
LKVPSIVGFYPLDIYEDSTLQDKMSLTIRFALQSDVKTLEEKDINAALEVVLEELKNSFG
VELR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacacgcagtattttaagtcatattttaccactaaagaatatcaccagcgcg
atgatgtatagcactttaaataagattgggctagaggtggagtctttttgtgcggtggtt
gcaccaaagagagtggttgtaggtaagattttagagtgtcaaaagcatccagatgcaaca
aagctaaatgttacacaagtggcaattagtggcacagaaggaagttatgaaacacgccaa
atcgtgtgtggtgcgtcaaatgcaagagaagggatttatgttgcagttgcacttgaagga
gctgaactccccggtattaccattaaaaaagctatgcttaggggggtggagagttgtgga
atgctatgttctacggcagagcttggatttccaaaggttaatgatggaatcgtagaacta
gattctagtattggcgagttggttatcggcaaggaaattagtgaatatcctgtgtttaat
gatgaaatctatgagatttctatcacgccaaatcgtggggattgtatgagcttaatgggg
gttgctagggatttaagcgtggcgtttgatttggaattaaagccacttaatccgccaaaa
gtttctgacaatgctccaggaattgggagagtgcttcaaattgttgccaatgataagcat
gatgcgtctttgctttttcaagcaatggaaataaaacctagtgcattgcctttgtgtgtg
aatttgcttttggcgcataatggaatcttagaaaattcttggctcaaagatgcactaagt
tttagcacactttttagcggagtgattttaaatgcgtatccgcaaagtttttgccagctt
gatggacaaaaggttgttttaacgcttaaaaaagatgaacgcggacttgagagtatttat
cacgaaaatgagaaactatctactattggtgtggagctttgcgcttatgaaagtaaggaa
tctttagtaaaagaaaaagaatttatcgtgcttgaagcaagttatattgcaccagagatt
atcgcacaaaaggtaatggaaacaaaaacaaaggtagatcctagggtgtttcaacgcact
tcgcgtgggagctgcccaaatttaaaagttgggctatctgtgctttcaggcttactttta
ggagaagagggagttttatatacagatacgcaagggtttattgaaataccgccaaaagat
cctattacgattgatttagagttaatggggcgtattattggtgtgtgtttggaaaagtta
aaggtgattaatattttaaaagggcttggctttggcgtggagattgcaagtgatgagaat
tttatcatcgcagagccacctttatttcgccacgatattgtaagtgtgcaagatgtagca
gaggaaattatccgtttttatgggattgataatgtgcctagcgcaccgcttgtgtttgtg
caaaatcatcagagtgatgatgccttaagagaatattattttaagagaaaaatcgcacaa
aaagctattggagtgggctttaatgaagcggtgcattttgtctttgaagatagagagaag
cttcaaagttgtgggtttgaagtgttagaagacacgctggatttgctaaatcctatcacg
caggatttaaatactttgcgtagcacgctattgcttggacttttaagggctgttgtgcat
aattgcaacaatggctttaatgcggtcagtctttttgaaatgggggctgtgtatgataag
aagcgcgaacaaagggctagtcttggctttattcaaagtggtttgctgtgtgaagaacgt
tacccaaatgcaaagggtataagaggggggtattttggcttttgcgatagaattgcgcgt
gtaataggagaatttagcttagaaccattggaatctaaaattaagctatttcatagcgga
caatgtgcaaaggtgcttcaaaatggcaaagaagtgggcgtgattgcaaccttgcatcca
caatttgctagcgagtttggattagatggaacttatctttgtgagttagatttagacttg
ctaaccgaagcgattccgcaagtgcaaatgtattcaaagtttcaaaaagcacagagagat
ttaagcgtagttttggataaaaagattccatattatgagattagaaaatgtattgaaagc
ctaaaagtgcctagcatagttggattttatccgcttgatatttatgaggattccaccttg
caagataaaatgagtttgacgattcgctttgctttgcaatcagatgttaaaacactggaa
gaaaaggatattaatgcagctttggaggttgtgttagaagagcttaaaaattcctttgga
gtagaattgcgatga
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