Helicobacter winghamensis: A0Z60_07800
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Entry
A0Z60_07800 CDS
T07030
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hwi
Helicobacter winghamensis
Pathway
hwi03420
Nucleotide excision repair
hwi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0Z60_07800
03430 Mismatch repair
A0Z60_07800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwi03400
]
A0Z60_07800
Enzymes [BR:
hwi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0Z60_07800
DNA repair and recombination proteins [BR:
hwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0Z60_07800
MMR (mismatch excision repair)
Other MMR factors
A0Z60_07800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QOQ97918
LinkDB
All DBs
Position
complement(1538720..1540813)
Genome browser
AA seq
697 aa
AA seq
DB search
MQDFLDDLNPSQREAATTIDGALLILAGAGSGKTKTITARLVYLIDVVGIPPGNTLTLTF
TNKAAGEMQKRALNMIQNTTMHPPLLCTFHKFGLLFLKFYITHLGRKANFILADSEDTKR
IIKDLNEDLAPLPLILSEISRYKNSQISPEEALKSAHNDTYKHIAKIYGKYQEFLLQKNM
VDFDDLLLLPLEIMQENKEIAKEVSEKYQYIMVDEYQDTNHLQYLLLKCLCSTHQNLCVV
GDDDQSIYSWRGANIQNILQFSEHFKGAKVIKLQENYRSTHTILQAANALIAHNKQRLGK
TLISTLGEGKKIEIFHSSDELEEVQNITKAIRKLLDSNISPKDIAILFRLNALSRSLEEG
FNRAKIPYVLVGAIRFYERSEIKDVLSYFRVLVNLEDDFSLARIINKPKRGIGKTTLDKV
LRLAQEHNTSVYGLFAKDYSALKGAISKKAYESFQEFFSTMLGLQESLKHSSLNFIDVFE
EKIGLCEALSQSNDEIDRVSNIEEFYGVYREYIKQNPLMELEDFLNDLALRSDQEDVEMR
TESKGVEGVSCMSVHSSKGLEFEYVFIIGLEEGFFPLVREDSNIEEERRLGYVAFTRAKK
ELFLSYVDSRFYRGNRAALMPSRFLGESGVSAIKAQFQKSVESDCKRDVFQKGDCVMHKI
FGAGRILEVSKSGKEVKLKINFGGLVRDILGSYVSKV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattttttagatgatttaaatcctagccagcgtgaagcagcgacaaccatagat
ggcgcacttttgattttagcaggggcaggcagtggtaagacaaagactatcactgctcgt
cttgtgtatttaattgatgtggttgggattccacctggcaacaccttaaccctaactttc
acaaacaaagcagcaggtgaaatgcaaaaacgggctttaaatatgattcaaaacaccaca
atgcacccgcccttgctttgcacttttcataagtttggattgctatttttaaagttttat
attacacatttaggaaggaaggctaattttattctagcagatagtgaggatactaagcgt
attataaaagatctaaatgaggatttagcaccgcttccgctaatccttagtgaaatttcg
cgttataaaaattctcaaatctctccagaggaagcattaaaatctgcacataatgatacc
tataaacatatagcaaaaatttatggaaaatatcaagaatttttattgcaaaaaaatatg
gtagattttgatgatttacttttgcttccattagaaattatgcaagaaaataaagaaatt
gctaaggaagtgagcgaaaaatatcaatatataatggttgatgaatatcaagatacaaac
cacttgcaatatttgcttttaaaatgtttgtgttctacacatcaaaacctttgcgttgta
ggtgatgatgatcaaagtatttatagttggcggggggcaaatatacaaaatatcttgcaa
tttagtgagcattttaaaggcgcaaaggtgattaagcttcaagaaaattatcgctccaca
catacgattttacaggcagcaaatgctctgattgctcacaataagcaaaggcttggaaaa
acgctaattagcactctaggcgagggtaaaaaaatagagatttttcactctagtgatgag
ctagaagaagtgcaaaatatcacaaaagcaatccgcaagcttttagattctaatattagc
cctaaagatattgcgattttatttcgtttaaatgcgctttctcgctcgctagaagagggt
tttaatcgcgctaagattccttatgttttagttggcgcaatccgtttttatgaaagaagt
gagattaaagatgtgttaagttattttcgtgtgcttgtgaatttagaagatgatttttca
ctagcgcgcattattaataaaccaaaacgcggaattggtaagacaacacttgataaggtt
ttgcgccttgcgcaagaacataatactagcgtgtatgggttatttgctaaagattatagt
gcgcttaaaggtgcaattagtaaaaaggcatatgagagttttcaagaatttttttctaca
atgttgggcttgcaagagagtttgaagcattctagccttaattttattgatgtttttgaa
gagaaaattgggctttgtgaagcattaagtcaaagtaatgatgaaattgatagggtgagt
aatattgaagaattttatggtgtgtatagggagtatatcaagcaaaatcctctaatggag
ttagaggactttttaaatgatttagccttaagaagtgatcaagaagatgtggaaatgcgc
acagaaagcaagggtgtggagggtgtatcttgtatgagtgtgcattctagcaaggggcta
gagtttgaatatgtgtttattattgggcttgaagagggttttttcccgcttgtgcgtgaa
gatagcaatattgaagaagagcgtaggcttgggtatgtagcttttacgcgtgcgaaaaaa
gagttgtttttaagttatgtagattctaggttttatcgtgggaatcgcgcagctttaatg
ccttcaaggtttttaggggagagtggcgtgagtgcgattaaggcgcaatttcaaaaaagc
gtggagagtgattgtaagagagatgtgtttcaaaagggagattgtgtgatgcacaaaatc
tttggcgcaggtagaatcctagaagttagcaaaagcggaaaagaagttaagcttaaaata
aattttggtgggcttgtgagagatattttgggaagttatgtgagtaaagtgtag
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