Hwangdonia lutea: RNZ46_02035
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Entry
RNZ46_02035 CDS
T09455
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hws
Hwangdonia lutea
Pathway
hws03030
DNA replication
hws03430
Mismatch repair
hws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RNZ46_02035
03430 Mismatch repair
RNZ46_02035
03440 Homologous recombination
RNZ46_02035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hws03032
]
RNZ46_02035
03400 DNA repair and recombination proteins [BR:
hws03400
]
RNZ46_02035
Enzymes [BR:
hws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RNZ46_02035
DNA replication proteins [BR:
hws03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RNZ46_02035
DNA repair and recombination proteins [BR:
hws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RNZ46_02035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
GIY_YIG_2
Rv2179c-like
DNA_pol_A_exo1
T5orf172
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WOD45296
UniProt:
A0AA97EPQ4
LinkDB
All DBs
Position
462872..464233
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIFKFDGHEIVDQFISLINPEREIQPFVVNLTGINSNM
LRSAPKFYEVAKRIVEITEGCIIVAHNAQFDNRILKTEFKRLGFDFERKTLCTVELAKDL
IPGQSSYSLGKLVRSLGIPVTDRHRASGDAMATVKLFKILLEKDTSKNIIQQSVRLNPKH
QLEPRHIDIIEQMPSETGVYYIHKANGDIIYIGKSNNIKKRINQHFTNTNQKSKKIQQNV
ATVTYETTGSELVALLKESEAIKRNKPIYNRALRRNVFTHALYSFKDENGYINLKIDDAD
GRKKAITTFSNRQSGKSFITKAVEDFNLCQKLTGLYKTKTSCFNYDIKTCNGACIEKEPA
EIYNKRVQALIDKNSYHNKNMVIIDKGRAVDERSAILIENGVFKGLGYFNLNYQINNIEI
LESIITPMDSNRDTQHIIQNYLRKNKRLKIITL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atttacgcaatattagacatagaaactactggtggtaagtataacgaagaaggcataacc
gaaattgcaatcttcaaatttgatggccacgagatagtcgatcaatttataagcctcata
aatcccgaacgcgagatacagccttttgttgttaaccttacaggcattaatagcaacatg
ttacgcagtgcccccaagttttacgaagttgcaaaacgcattgttgaaattaccgaaggt
tgtattatcgtggcacataatgcgcaatttgacaaccgcattttaaaaaccgaatttaag
cgcctcggtttcgattttgaacgaaaaaccctttgtactgtagaattggcaaaagattta
attcctggacaaagctcttatagtttgggcaagttggtacgctcgcttggtattccggtt
accgacaggcatcgagcttccggcgatgccatggccacggttaaattgtttaaaatactt
ttggagaaagacacttcaaaaaacatcatccaacaatccgtacgcttaaaccccaaacat
caattagaacctcgccacatcgatattatagagcaaatgccatcagagactggtgtttac
tacattcacaaggccaatggcgacataatttacatcggaaaaagcaataatataaaaaag
cgcatcaatcaacattttacaaataccaatcaaaaatccaaaaaaatacagcaaaacgtt
gccacggtaacttacgaaaccacgggcagtgaattggtggcacttttaaaggaaagcgaa
gccattaaacgcaacaaacccatatacaacagagcgttacggcgcaacgtttttacacac
gccctgtatagttttaaggatgaaaacgggtatattaatttaaaaattgatgatgccgac
ggcagaaaaaaggccataaccacatttagcaaccgccaaagcggaaaaagctttatcaca
aaagcggttgaagatttcaacttatgccagaaactaacaggactttacaaaaccaaaacc
agttgttttaactacgatattaaaacctgtaacggggcttgtattgaaaaggaaccggcc
gaaatttacaataaacgcgtacaggcactaatagataaaaacagttatcacaataaaaac
atggtgattattgataaaggtcgagcggttgatgaacgcagtgccatcctaatagaaaat
ggggtttttaaaggtttgggctattttaatttgaattaccaaataaacaatattgagatt
ttagaatccattattacgcccatggacagcaatagagatacccaacacatcattcaaaat
tatctcagaaaaaataaacggttaaaaattattacgctttaa
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