Hwangdonia sp. SCSIO 19198: RNZ46_02870
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Entry
RNZ46_02870 CDS
T09455
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
hws
Hwangdonia sp. SCSIO 19198
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_50
MCM
HTH_28
Oxidored_nitro
Mg_chelatase
Mycovirus_RNAse
Mga
HTH_23
HTH_17
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WOD44213
UniProt:
A0AA97EQF0
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Position
681045..682313
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AA seq
422 aa
AA seq
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MESVQAIKQRFSIIGNTKALNRAIEKAIQVAPTDISVLVTGESGVGKESIPKIIHQLSHR
KHNKYIAVNCGAIPEGTIDSELFGHEKGAFTGATQTRSGYFEVADGGTIFLDEVGELPLT
TQVRLLRVLENGEFIKVGSSKVQKTDVRIVAATNANMFQSIQKEKFREDLYYRLSTVDIH
LPPLRERQEDIHLLFRKFASDFALKYKMPTVKLTDNAIQVLLKHRWNGNIRQLRNVAEQV
SVLEQNRIITAEVLKSYLPTSGSNLPAIVKTAKSESDFSSEREILYKVLFDMKSDLNDLK
KLTMELMKNGNIKDVEKDHGSLIQKIYGDDDDSETDYEEALTETEVISIPEHSNTKTENT
SKQDKYHFAEEIEEEETLSLHDKELELIKKSLERHQGKRKLAAAELGISERTLYRKIKQY
DL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgttcaagcaataaaacaacgttttagtattataggcaatacaaaagcacta
aaccgcgccattgaaaaagcaattcaagtggcgcccacagatatttcggttttagtaact
ggcgaatccggggttggtaaggaaagtattcctaaaattatacatcagttatcgcacaga
aaacacaataaatacattgcggtaaactgtggtgccattcctgaaggcactattgacagt
gagcttttcggacatgaaaaaggggcgtttacaggtgccacacaaacacgaagcggctat
tttgaagtggccgatggcggcactatttttttagacgaagttggtgaactcccattaacc
acccaagtgcgtttattgcgtgttttagaaaatggcgagtttataaaagtaggctccagc
aaggttcaaaaaaccgatgtgcgcattgttgcggcaaccaacgcaaatatgtttcagtct
attcaaaaagaaaaatttcgcgaagatttatactacagattaagcaccgtagatattcat
ttaccaccactgcgcgaacgtcaagaagacattcatttattgttcagaaaatttgccagc
gatttcgcattaaaatataaaatgcctacggtaaaactaaccgataatgccattcaggtt
ttattaaaacaccgttggaacggaaatattcgtcagttacgcaacgtcgcagaacaggtt
tctgttttagagcaaaaccgcatcattaccgccgaagtgttaaaaagttatttaccaaca
tcgggcagcaatttaccggccattgttaaaacagccaaatcagaaagcgattttagtagc
gagcgagagattttgtataaagtcctttttgatatgaaaagtgatttaaacgatctgaaa
aaactcaccatggaactcatgaaaaatggcaacataaaagatgttgaaaaagaccacggc
agtttaattcagaaaatttatggcgatgatgatgactccgaaacagattacgaagaagcc
ttgacggaaaccgaggtaatttcgattcctgagcactcaaatacgaagactgaaaacaca
agcaaacaagacaaatatcactttgccgaagaaattgaagaagaggaaaccttatcgtta
cacgacaaagaattggaattaatcaaaaaatcgcttgagcgtcaccaaggaaaacgtaaa
ttagccgcagccgaattgggcattagcgaacgcaccttataccgaaagattaaacaatac
gatctttaa
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