Hwangdonia lutea: RNZ46_03590
Help
Entry
RNZ46_03590 CDS
T09455
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hws
Hwangdonia lutea
Pathway
hws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RNZ46_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hws03019
]
RNZ46_03590
03016 Transfer RNA biogenesis [BR:
hws03016
]
RNZ46_03590
Enzymes [BR:
hws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RNZ46_03590
Messenger RNA biogenesis [BR:
hws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RNZ46_03590
Transfer RNA biogenesis [BR:
hws03016
]
Prokaryotic type
tRNA degradation factors
RNZ46_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WOD44349
UniProt:
A0AA97EMP3
LinkDB
All DBs
Position
complement(832121..834373)
Genome browser
AA seq
750 aa
AA seq
DB search
MIPKVFKEVIDLGDGREISIETGKLAKQAHGSVVVRSGKCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDEDVMPDAMAGLAASAAIQLSDFPFECPISEARVGRINGEFIINPTRAQLAESDIDMMI
GASADSVMMVEGEMDEISEEEMAEAIKFAHEAIKEQCAAQVRLAEAFGKKEVREYAPERT
DEDLAKKIHDMAYDKVYAIAKAGSAKHERSAAFEAIKEEIKATFSEEELEDFGGLVSKYY
YQAEKAAIRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSALFTRGETQALATVTLG
TSREANQIDMPSYEGEERFYLHYNFPPFSTGEARPIRGTSRREIGHGNLAQRALKGMVPD
ESPYTVRVVSEILESNGSSSMATVCAGTMALMDAGVQLIKPVSGIAMGLISDAESGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQARDGRLHILEKL
TDTIAEPNAEVKEHAPTMVTRRIPNEFIGALIGPGGKVIQELQKETDTTIVINEDPVTEE
GIVEILGVGSKGIDAVLAKIDALLFKPQVGSVYEVKVIKMLDFGAVVEYTEAPGNEVLLH
VSELAWERTENVSDVVKMGDVFDVKYFGIDPRTRKEKVSRKAILPKPEGYVARPPRDNNN
RGGRDNRGRDNRGRDNRRDDRKPREGKKED
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtttttaaagaggtcattgacctaggagacggtagagaaatttctatc
gaaaccggaaaattagcaaaacaagcgcatggtagcgttgtagtgcgatctggaaaatgt
atgttattatgtacagttgtttccaattacaaacagtcggatgttgactttttaccgttg
accgtagattacagagaaaaatttgctgcctcgggacgttacccaggtggtttctttaaa
agagaagcaaggcctagtgatggtgaagtattgacaatgcgtttggtagacagggtacta
cgtccgttatttccaaaagattatcacgctgaaactcaggtgatgatacaattaatgtct
catgatgaggacgttatgccagatgccatggcaggattagcggcctcagcagctattcaa
ttatcagattttccatttgaatgcccaatctctgaagcaagagttggtcgtattaatggc
gaattcattattaacccaacacgtgctcaattagcagaatctgatatcgatatgatgatt
ggagcctctgccgattctgtaatgatggttgaaggtgaaatggatgagatttctgaagaa
gaaatggcagaagctattaagtttgcacatgaggccattaaagaacaatgtgctgctcaa
gtaagattggcagaagcatttggaaagaaagaagttcgtgaatacgctccagaaagaacc
gacgaggatttagcgaagaaaattcatgatatggcttatgataaagtgtatgctatagca
aaagcaggatctgctaaacacgaaagaagcgctgcgtttgaagccatcaaagaagaaatc
aaagctacgttcagcgaagaagagttagaagactttggtggattagtatcaaaatattat
taccaagctgaaaaagcggctattcgtgatttaaccttaaatgaaggtttacgtttagat
ggtagaaaaaccgatgaaatcagacccatttggtgtgaggttgattatttaccatcaaca
catggttctgcactttttacacgtggtgaaacacaagcattggctacggttactttgggt
acgtcaagagaagctaaccaaatagatatgccatcttacgaaggtgaagagcgtttctat
ttacattataactttcctccattttcaaccggtgaagcgcgacccatacgtggcacatcg
cgtcgtgagataggacatggtaacttagcacaacgtgctttaaaaggtatggtgccagat
gagagcccttataccgtacgagttgtttctgaaatattagaatccaacggttcgtcttca
atggcaacggtttgtgccggaactatggcattaatggatgccggtgttcaattgataaaa
ccagtttctggtattgccatgggattgatttccgatgctgaatcaggaaagtatgcggtt
ctttcggatattttaggtgatgaagatcatttaggtgatatggattttaaagtaaccggt
accgcagatggtattaccgcttgccaaatggatattaaggtaaaaggtctttcgtatgaa
attcttgtaaatgccttgaaacaagctcgtgatggccgtttacatatcttagagaaatta
acagataccattgctgagcctaatgccgaggttaaagaacatgcgccaacaatggttaca
agacgcatcccgaatgagtttattggagccttaattggtcctggtggaaaagtaattcag
gaattgcaaaaagaaacggatacaactattgttattaacgaagaccctgtaaccgaagag
ggtattgttgaaattttaggtgttggcagtaaaggtattgatgctgttttagcaaaaata
gatgctttattgtttaagcctcaagtgggtagcgtgtatgaagttaaggtcattaaaatg
cttgattttggtgcagtagtagaatatactgaagctccaggaaatgaagtgttattacat
gtttctgaattagcatgggaacgtactgaaaacgtatcggatgttgtgaaaatgggtgat
gtttttgatgtgaaatactttggtattgaccctagaacccgtaaagaaaaggtgtctcgt
aaagctattttaccaaaacctgaaggttatgtggcaagaccacctagagataacaacaat
cgtggtggacgcgacaacagaggtagagacaatcgcggacgtgataatcgtcgtgacgac
agaaaacctagagaaggtaagaaagaggattaa
DBGET
integrated database retrieval system
