Hwangdonia lutea: RNZ46_05240
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Entry
RNZ46_05240 CDS
T09455
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hws
Hwangdonia lutea
Pathway
hws03030
DNA replication
hws03430
Mismatch repair
hws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RNZ46_05240 (dnaE)
03430 Mismatch repair
RNZ46_05240 (dnaE)
03440 Homologous recombination
RNZ46_05240 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hws03032
]
RNZ46_05240 (dnaE)
03400 DNA repair and recombination proteins [BR:
hws03400
]
RNZ46_05240 (dnaE)
Enzymes [BR:
hws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RNZ46_05240 (dnaE)
DNA replication proteins [BR:
hws03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RNZ46_05240 (dnaE)
DNA repair and recombination proteins [BR:
hws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RNZ46_05240 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
DUF6824
Motif
Other DBs
NCBI-ProteinID:
WOD44663
UniProt:
A0AA97ERE5
LinkDB
All DBs
Position
complement(1215960..1220348)
Genome browser
AA seq
1462 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDAMGNCIDHQDYLVQPDGFNIPY
DAEKIHGISTELAHEQGVPLAEVLEKFNEALCKTKFVVGQNVKFDLNIMGAEFVRGDVAN
QLQELPVLDTCTEHTASLCQIPGGRYGKFKLPTLTELHEFLFNTPFAEAHNATADVEATT
RCFLELIRLGEYTKEQLDVQPDYFENFKKENPDTIQLIGLKHINLKKESAKINARLQKAQ
TVDISSAEIKQNVSELKEVDFVHLHNHSQFSVLQSTMSVSDIVAAAAEFNMPAVALTDHA
NMMGAFHFVNAVNKHNKDVKAKIEAAKATGETATAKEIKPIIGCEFFVCENHLDKTRKDN
GYQIVLLAKNKNGYHNLAKLSSHAFVNGFYYLPRIDKKLIQEYKEDLICLTGNLYGEVPS
KVLNIGENQAEEALLWWKNEFGDDLYVELMRHNQEDENRVNPTLIQLAKKHDVKLVATNN
TYYRKQEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSSEAMKNSFKDVPE
AIANIQEVVDKVEAFQLARDVLLPAFDIPEQFKHEADLTDGGKRGENAYLRHLTYEGAKK
RYGEDLSDEVKERLDFELSVIENTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVA
YCLWITNIDPLKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIEKYGANQVAQII
TYGTMAAKSSIRDTARVLDLPLFDADRIAKLIPTMSKLGKIFGVDEKELAKKFRTEDLEK
VNQLLNISEGDDLEAETVNLARTLEGSVRNTGIHACGVIITPDDITKFVPVATAKDSDLY
VTQFDNSVVEDAGLLKMDFLGLKTLTLIKDTVKIVKAKHGIQLDPDSFPLDDEETYALFQ
RGETVGVFQYESPGMQKHLKDLKPTVFEDLIAMNALYRPGPMEYIPSFVRRKHGDEDIEY
DLPAMEEYLKETYGITVYQEQVMLLSQKLANFSKGEADVLRKAMGKKQIAVLDKMKPKFI
EQASANGHDAKILEKVWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKQVTFFMEECKRMKLNVLGPDVNESYYKFSVNQDNAVRFGMGAIKGVGHGAVMT
IVENRKKDGHYKSIFDFAKRIDLRAANKKAFENLALAGGFDSLADTHRAQFFHDAGDGIT
FLEKAIKYAQKHKENENSAQVSLFGEASEVQIAEPEVPPCEEWGTMEKLSKEREVVGVYI
SGHPLDDFKTEMKTFCNGTVAMFNNLEPYVNREIVFGGVVTDVQHRVSKQGKGWALFTIE
DYTDSFEFRIFGEEYLKFRHFLMKNNFVFVKTFVREGWVNKDTGKKSDPRLQFNSFQLLH
DVMENYAKKLSIQVDIKDLNEQKIVALKELINMHPGNQALNFLVYDTKEKIKLTMPSRKQ
KVKVCQELLGELEARDVRFKLN
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacagaaaccacaggattaccaaagcgatgggacgcacccatt
acagatactgataactggccaaggtgtatacaaattgcatggcaattgcacgatgcgatg
ggtaactgtatcgatcatcaagattatttggtgcaaccagatgggtttaacatcccgtat
gatgccgaaaaaattcacggtatttctaccgaattagctcatgaacaaggcgtgccgttg
gccgaggttttagaaaaatttaatgaagctttgtgcaaaaccaaattcgtggttgggcaa
aacgtaaagttcgatttaaacattatgggcgccgaatttgtacgtggtgatgtggcaaac
caattgcaggaactgcccgttttagacacctgtaccgagcatactgcgagtttgtgtcaa
attcctggtggacgttatggcaagtttaaattaccgactttaaccgagcttcacgagttt
ttgtttaatacaccttttgccgaagcccacaacgccacagcagatgtcgaggcgaccaca
cgttgttttttagagttgattcgattgggagaatataccaaggaacaattggatgttcaa
cctgattattttgagaatttcaaaaaagaaaaccccgataccattcagcttatcggatta
aagcacatcaatcttaaaaaagaaagtgctaagataaatgcgcgattgcaaaaggcgcaa
accgtcgatatttcttcggcagaaatcaaacaaaacgtatccgaattaaaggaagtcgat
tttgtgcatttgcataatcattcccaattttcggtattgcaatctaccatgagcgtgtcc
gatattgttgcggcggcggcagaatttaacatgcccgctgtggccctaacagaccatgca
aatatgatgggtgcttttcactttgtgaatgcagtaaacaagcataataaagatgttaag
gctaaaattgaggctgctaaagcaactggtgaaacggctaccgccaaagaaataaaaccc
attattggctgcgagttttttgtctgcgaaaaccatttagataaaaccagaaaagacaat
ggttaccaaattgtactgttggcaaaaaacaaaaatggttaccataatttggcgaaacta
tcgtcgcacgcctttgtaaatggcttttattatttacctagaattgataaaaaactcatt
caagaatataaagaagacttaatttgcttaacaggaaacttatacggcgaagtgccaagt
aaagttttaaatattggcgaaaatcaagccgaagaagctttgctttggtggaaaaacgag
tttggagacgatttgtatgtcgagttaatgcgtcataatcaagaagatgaaaatcgtgtg
aatcctacgttaattcaactggcaaaaaagcacgatgttaagctggtggccaccaacaac
acctattacagaaagcaagaagatgccaatgcacacgacattttactttgtgtaaaggac
ggcgaaaagcaggccacacccattggtcgtggtcgcggctatcggtacggattgcccaat
caggagtattattttaagtcttctgaagccatgaaaaatagctttaaagatgtacccgag
gcaattgcaaatattcaagaagtagtcgataaagttgaagccttccaattggctcgcgat
gtgttattgcctgccttcgatattcctgaacagtttaaacatgaagccgatttaaccgat
ggcggcaaacgtggtgaaaacgcgtatttacgtcatttaacttacgagggcgcgaaaaaa
cgctacggagaagatttatccgatgaggttaaagagcgtctcgattttgagttaagcgtt
attgaaaacacagggtatcccggatatttcttgattgttgaagattttattcgcgaagcc
cgaaatatggatgtgtccgttggtcccgggcgtggttcggcagcaggttcggtagtggca
tattgcctttggattaccaatatcgatccgcttaaatacgatttactttttgagcgtttt
ttaaatccagaccgtgttagtatgcccgatatcgatatcgattttgatgacgaaggtcga
agccgtgtaatggattacgtgattgagaaatacggtgccaaccaagtcgcgcaaattatt
acctatggtaccatggcagcaaaatcctccattcgagatacggcgcgggtactcgattta
ccgttgtttgatgccgatagaattgcaaaactcatcccaaccatgtctaaactcggaaag
atatttggtgtggatgaaaaggagttggctaaaaaatttaggactgaggatctggagaaa
gttaatcagcttttaaatatttctgaaggtgacgatttggaagcagaaacggtaaacctc
gcacgaacgcttgaaggttcggtgcgaaataccggaattcatgcgtgtggggttatcatt
accccagacgatattaccaaattcgttcccgtggctacggcaaaagattccgatttgtac
gtaacccaatttgataactcggtggttgaagatgccggtttgttaaaaatggatttttta
gggttgaaaacgctgactctaattaaagacaccgtaaaaatcgtaaaagcaaaacatggt
attcagctcgatccagattcatttcctttagacgatgaagaaacgtatgcactattccaa
cgcggagaaacggttggtgtattccaatacgaatctccgggcatgcaaaaacaccttaaa
gatttaaagcccactgtttttgaggatttaattgcgatgaatgccctgtatcgaccgggt
cccatggaatacattccgagtttcgtgcgcagaaaacatggcgacgaggatattgagtac
gatttgccagccatggaagaataccttaaggaaacttacggtattacggtatatcaagag
caagtgatgttgctttcgcaaaaactggcgaatttctctaaaggtgaagccgatgtgttg
cgtaaagccatgggaaaaaagcagattgcggtactcgataaaatgaagccgaaatttatt
gaacaagccagcgcaaacggacatgatgccaaaattctagaaaaagtttggaaagactgg
gaggcctttgcgagttacgcctttaacaaatcgcattccacttgttatgcgtggattgct
taccaaacggcttatttaaaagcccattatcctgccgaatatatggccgcagtgctgtcc
aataacatgaacgatattaagcaggttaccttttttatggaggaatgtaaacgcatgaaa
ttaaacgtgctcgggcccgatgtaaacgaaagttactacaagttttcggtaaaccaagat
aatgcggtgcgttttggtatgggcgctattaaaggtgttggccacggtgcggtgatgacg
attgttgaaaacagaaaaaaggatggccattataaatctattttcgatttcgcaaagcgg
atagatttacgtgcagccaataaaaaagcgtttgaaaatttagcattagcagggggtttt
gatagtttggccgatacccacagagcacaattttttcatgatgctggcgatggtattacg
tttcttgaaaaagccataaagtatgctcaaaaacacaaagagaacgaaaactctgcgcag
gtaagtttgtttggtgaggcgagcgaagtgcaaattgcagaacccgaagtgccaccatgc
gaagaatggggtaccatggaaaaattgagtaaagaacgcgaagttgtcggcgtttatatt
tctggacatccgttggatgattttaaaaccgaaatgaaaaccttttgtaacggtacggtt
gccatgtttaataatttagagccttacgtgaatcgggaaattgttttcggtggcgtagta
accgatgtgcaacaccgtgtgagtaaacagggtaaaggatgggcactatttactattgaa
gattacaccgatagttttgagtttagaatttttggtgaggagtatttaaaattccgccat
tttttaatgaaaaacaattttgtatttgttaaaacttttgtgcgcgaaggttgggtaaat
aaagacaccggaaagaaaagcgacccacggttgcagtttaatagtttccagttattgcac
gatgtgatggaaaattatgctaaaaaactatctattcaagtggatattaaagacttaaac
gaacaaaaaattgttgcgctaaaagaattaataaatatgcatccggggaatcaagcgctt
aattttttggtgtacgataccaaagaaaaaattaaattgaccatgcccagtagaaagcaa
aaagtaaaagtgtgccaagaacttttgggtgaattagaagcgcgggatgttaggtttaag
ttgaattag
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