Hwangdonia lutea: RNZ46_06285
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Entry
RNZ46_06285 CDS
T09455
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
hws
Hwangdonia lutea
Brite
KEGG Orthology (KO) [BR:
hws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hws03400
]
RNZ46_06285
DNA repair and recombination proteins [BR:
hws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RNZ46_06285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Spo16_N
Motif
Other DBs
NCBI-ProteinID:
WOD44871
UniProt:
A0AA97EPU3
LinkDB
All DBs
Position
1455826..1456296
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AA seq
156 aa
AA seq
DB search
MGYNEEKIKVPRFNEESGFYTTKKRSKIMSRIGGKNTKPELQFRKALWAKGVRYRVNSKK
IFGKPDVSIKKYKLAVFIDGAFWHGYNWQERKAQLKSNRGFWIPKIERNMQRDKEVNLKL
KNLGYSVFRFWDHDIKNELDKCINDVMVYIHSGEIL
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgggctataacgaagaaaaaataaaagtccccagattcaatgaggaatccggtttctac
accaccaaaaaacgctctaaaataatgagccgtattggaggcaaaaacaccaaaccggaa
ctgcaattcagaaaagcgttgtgggcaaaaggcgtaaggtatcgtgtaaactccaaaaaa
atctttggcaaacccgatgtgtccatcaaaaaatacaaactagctgtttttattgatggc
gcattttggcacgggtacaattggcaggaaagaaaagcgcaacttaaatccaatcgcggt
ttttggattcctaaaatagaacgcaatatgcaacgtgataaagaagtgaatttaaaattg
aaaaatttaggctattccgtttttaggttttgggaccacgacataaaaaatgagctcgac
aaatgcattaatgatgtgatggtttatattcattctggcgaaatattgtga
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