KEGG   Hwangdonia lutea: RNZ46_08610
Entry
RNZ46_08610       CDS       T09455                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hws  Hwangdonia lutea
Pathway
hws03030  DNA replication
hws03410  Base excision repair
hws03420  Nucleotide excision repair
hws03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hws00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RNZ46_08610 (polA)
   03410 Base excision repair
    RNZ46_08610 (polA)
   03420 Nucleotide excision repair
    RNZ46_08610 (polA)
   03440 Homologous recombination
    RNZ46_08610 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hws03032]
    RNZ46_08610 (polA)
   03400 DNA repair and recombination proteins [BR:hws03400]
    RNZ46_08610 (polA)
Enzymes [BR:hws01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RNZ46_08610 (polA)
DNA replication proteins [BR:hws03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RNZ46_08610 (polA)
DNA repair and recombination proteins [BR:hws03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RNZ46_08610 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RNZ46_08610 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 RNase_H_2 HHH
Other DBs
NCBI-ProteinID: WOD42061
UniProt: A0AA97HNI1
LinkDB
Position
complement(1987391..1990237)
AA seq 948 aa
MSDQKRLFLVDAYALIFRGYYAFIKNPRINSKGEDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSVDRVEMFEAYKANRDETPEGIKTAVPYICEILKAMHIPIMVKEGYEADDVIGT
LSRQAEKEGYQTFMVTPDKDFAQLVTENIFMYRPVFGGGYETWGIPEVQKKFEVTDPMQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFIAQFGSMEGLLANTDQLKGKMKEKVEANAELG
LLSKQLATIMLDVPVTFNAKDFELDHPDVEKVKEIFQELEFRRLTDNFLKTFSSETEPAQ
TSPEKASEKTETKETPKEIKSAGAGQFSLFGAEDNSAEAPTSNTRKTSATSSHFYQSVAS
GMATKLFIKNLMNQTSVCFDTETTGLNPLTAELVGIAFSWEVGKGFYMPFPENKDEAQEL
IEQLRPFFESESIEKVGQNLKYDIKVLAKYNVSVKGKLFDTMLAHYLINPDMRHNMDVLA
ETYLNYTPISITELIGKKGKNQLSMREVPLEKQTEYAVEDADITLQLKEHFEKELGEANT
QKLFDEIEIPLLRVLAAMELEGINLDKGFLNALSEQLNKDIKDLETKIYTEAGEEFNIAS
PKQLGVILFEKLKLVDKPKKTKTGQYATGEDILSYLAKDHDIIKNILEYRGLSKLKSTYV
DALPLQVEELTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRDENYT
LLAADYSQIELRIIAALSKEENMIEAFKNGEDIHASTASKVFNVPLGEVTREQRSNAKTV
NFGIIYGVSAFGLSNQTDLSRSESKALIDTYYATYPKLRSFVHEQIDFARDNGYVQTVLG
RRRYLKDINSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIHNKLEAGNYKTKMLLQV
HDELVFDVYKPELEAMKTLIKTEMEQAFVMDVPLDVEMDIGDNWLEAH
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgtcagatcaaaaacgcctttttctagttgatgcctatgcgctaattttccgtggctat
tacgcctttataaaaaacccgcgaatcaattccaaaggcgaagacacctcagccattatg
ggttttatgaactcccttttggatgttataaaacgcgagcgccccgaccatttggccgta
tgttttgataaaggcggcagtgtggatagggtagaaatgtttgaggcctacaaagccaat
agagatgaaacgcccgaaggcataaaaacggcggtaccgtacatttgtgagattttaaaa
gccatgcacattcctattatggttaaggaaggctacgaggccgatgatgttattggcacg
ctctcccgtcaagcggaaaaagaaggctaccaaacctttatggtaacgcccgacaaagat
tttgcacaattggtaaccgaaaatatttttatgtaccgccccgtttttggtggtggttac
gaaacttggggcatccccgaagtacagaaaaaatttgaagtaaccgaccccatgcaagtc
attgactttttaggaatgatgggcgattccagcgataatattcccggattgcccggtgtt
ggtgaaaaaacagctaaaaaatttattgcccaatttggaagtatggaaggcttattggcc
aataccgaccagctaaagggcaaaatgaaagaaaaagtagaggccaatgccgaattaggt
ctgctttccaaacaactggcgaccatcatgctggatgttccggtaacttttaatgccaaa
gattttgaactcgaccatcccgatgttgaaaaagttaaagaaatctttcaggaattggag
tttagaagattgaccgataattttcttaaaacgttttcatcggaaacagaacccgctcaa
acatcacccgaaaaagcttcagagaaaacggaaacaaaagaaacaccaaaggaaattaaa
tctgctggagctggtcaattttctctatttggagcagaagacaattccgcggaagcgcca
acaagcaacaccagaaaaacctcggcaacatcgtcgcatttttaccaaagtgtggcttca
ggaatggcaaccaaattgtttattaaaaatttaatgaaccaaacttcggtctgttttgat
accgaaaccaccggtttaaacccattgacagcagaattggtaggcatcgctttttcttgg
gaagtgggcaaaggattttacatgccatttcctgaaaacaaagatgaagcacaagaactc
attgaacaattacgtccgttttttgaaagtgaatctatcgagaaagttggtcagaattta
aaatacgacattaaggttttagcaaaatacaatgttagcgtaaaaggcaaattgttcgac
accatgttggcacattatttaattaatccagatatgcggcataatatggatgtgcttgcc
gaaacctatttgaattacaccccaatttcgataaccgaactcataggaaaaaaaggcaaa
aaccaactatcgatgcgtgaggtgcctttagaaaaacaaaccgaatacgctgttgaagat
gccgatattaccttgcagttaaaagaacattttgaaaaagaattgggcgaggccaataca
caaaaactgtttgatgagattgaaattccgctactgcgtgttttagcggccatggaattg
gaagggattaatttagataagggttttttaaatgcactatcggagcaattaaacaaagat
ataaaggatttagaaacaaaaatttataccgaagctggcgaggaatttaacattgcatcg
ccaaaacaattgggtgttattttatttgaaaaacttaaactggttgacaagcctaaaaaa
accaaaaccggacaatatgctacgggcgaagacattttatcatacctcgctaaagaccac
gatattattaagaatattttagaatatcgcggattatccaaactaaaaagcacctatgtg
gatgccttaccgcttcaggttgaagaattaacgggacgcgtgcacaccgattatatgcaa
accgttgcggcaacggggcgtttaagtagcaacaaccccaatttgcaaaacattcctatt
cgtaccgaacgtgggaggcaagtgcgtaaagcgtttattcctcgtgatgaaaattacact
ttgttggctgccgattattctcaaatagaactgcgtattattgcagctttgagcaaagaa
gaaaatatgattgaggcctttaaaaacggcgaggatattcatgcctcaaccgcttcaaaa
gtgtttaatgtgcctttgggcgaagtaacccgagagcaacgaagcaacgccaaaaccgta
aacttcggtattatttatggggtttcagcttttggactgagcaaccaaaccgatttatcg
cgaagcgaatccaaagcattgattgacacttattatgccacctatccgaaactgcgaagt
tttgttcacgagcaaatcgattttgctcgcgataacggctatgtgcaaacggttttgggg
cggcggcgttatttaaaagacattaattcccgcaacgccgtggttcgtggtgctgccgaa
cgaaatgctgtaaatgcccccattcagggaagtgccgcagacattattaaaattgccatg
atcaatattcataataaattagaagctggcaattacaaaaccaaaatgcttctgcaggtg
cacgatgagttggtttttgatgtgtataaacctgaacttgaagccatgaaaaccttaatt
aaaaccgaaatggaacaggcttttgtaatggatgtgccgttggatgtggagatggatata
ggcgataattggctagaagcgcattaa

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