Hwangdonia lutea: RNZ46_13455
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Entry
RNZ46_13455 CDS
T09455
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hws
Hwangdonia lutea
Pathway
hws03030
DNA replication
hws03430
Mismatch repair
hws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RNZ46_13455 (dnaE)
03430 Mismatch repair
RNZ46_13455 (dnaE)
03440 Homologous recombination
RNZ46_13455 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hws03032
]
RNZ46_13455 (dnaE)
03400 DNA repair and recombination proteins [BR:
hws03400
]
RNZ46_13455 (dnaE)
Enzymes [BR:
hws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RNZ46_13455 (dnaE)
DNA replication proteins [BR:
hws03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RNZ46_13455 (dnaE)
DNA repair and recombination proteins [BR:
hws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RNZ46_13455 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
PhyH
Motif
Other DBs
NCBI-ProteinID:
WOD42995
UniProt:
A0AA97EM28
LinkDB
All DBs
Position
3121051..3124011
Genome browser
AA seq
986 aa
AA seq
DB search
MYLNCHTYYSLRYGTFSEVELLELAKSKQIKTIALTDINNTSGCLNFIQQSKKYNIKPIV
GIDFRNGAKQKFVGIAKNNKGFYELNKVLSYHLENKIEFPNLAPKLSNTFIVYPFETVLE
LEITSFQKHEFIGVSVEELKKLPFSKLKSFKDKLVIQQPVTVRNKKDFNAHRLLRAIDNN
CLLSKLPKTEECRPNEKMISKENLEIAFSDFPHIIENTLHLINQCCIDFGFGDERQSQNL
KLYTNSVEEDFKSLKKLCDTGFFKRYPNPTDKVFKRLNKELKIIKELNFVSFFLINHDIV
TYAKSQGYFHVGRGSGANSIVAYIIGITDVDPVELDLYFERFINPYRASPPDFDIDFSWK
DREDITQYIFNRFENVALLATYNTFKYRAVVRELGKVFGLPKEEIDKLSKGNLSINQIDE
IGQLVLKYGKLIDGFPNYVSVHSAGILILDKSIHNYSATFLPPKGYPTVQFDMIIAEDVG
IFKFDILGQRGLAKIKDTLQIIAKNRPELPPIDIHDLPRFKNDKKINNLLKSGGAIGAYY
VESPAMRGLMIKLQTQDYLGLVAASSIIRPGVSGSGMKEEFIKRHRFPEFRKNAHPVLLK
IMPDTYGIMVYQEDVLKVAHQFAGLTLGEADVLRRGMSGKYRSREEFLAVEQKFISNCKN
KGYSDKLINEVWSQIKSFAGYAFAKGHSASYAVESYQSLFLKCYFPIEFMVAVLNNGGGF
YSTEHYLHEAKMQGANIKLPCINYSDHANRVIGKDIYLGFGYLKNLEKLVVQRLLTERQW
QGHYTSLDDFIDRVAISIEQISILIRIGCFRFTGKSKTELMWQAIFKLNATKYSNKQPKL
FKTKHKHFELPVLEVSAVESAYDEMELLGFPLCGYFDLVDEPLEDDITSIDMSNYANKEV
IIYGNLVNSRYNKTSQGKLMRLSTFVDKHGKYFDAVHFTEVVHKYPIHGLGIYKCLGVIT
KKHGFCSMIISKSRKVRIKPNPRAID
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttaattgtcacacatattattctttgcgctatggcacgttttcagaagtggaa
cttttggaattggcaaaaagcaaacaaataaaaaccatagccttaaccgatattaataat
acttcgggatgtttaaattttattcagcaatcaaaaaaatataatataaaacctatagtc
ggtatagattttagaaacggagcaaaacaaaaatttgttggtatcgctaagaataataaa
ggtttttatgagctgaacaaggtattatcgtatcatctcgaaaataaaatagagtttcca
aatctagcaccaaaactttcaaatacatttattgtttacccttttgaaactgttttagag
ttggaaatcacatctttccaaaagcatgagtttattggggtttctgttgaagaattaaaa
aaacttccattttccaaattgaaaagttttaaagataaattagtcattcagcaacccgtt
accgtaagaaacaaaaaagattttaatgcccatcgattacttagggctattgataataac
tgtttattaagtaagcttccaaaaactgaagaatgcagaccaaatgaaaaaatgatttca
aaagaaaacctagaaatcgcattttctgattttcctcatattatagaaaacacgctacat
cttataaaccaatgttgcatcgattttggttttggagatgaacggcaatctcagaattta
aaattatataccaattcggttgaggaagattttaaaagcttgaaaaaactatgtgatacg
ggtttttttaaacgatatccaaacccaacggataaggtgtttaaaagattaaacaaagag
ttaaaaattataaaggaactaaattttgtgagtttctttttaatcaatcacgacattgtt
acttacgctaaaagccaaggctattttcatgtgggtcggggtagtggtgccaatagtatc
gtggcgtatattattggtattacagatgtcgatccggttgagttggatttatattttgag
cgttttataaatccgtacagggcatcgccaccagatttcgacattgatttttcgtggaaa
gatcgcgaggatattacccaatatatattcaacagattcgaaaacgtggcattattggcc
acttacaatacctttaaatatcgcgcggtagtaagagaattaggaaaagtttttggtttg
ccaaaagaagaaatagataagttgagtaaagggaatttatctataaatcaaatagatgaa
attgggcaactggttttaaaatacggtaaattaattgatggttttcctaattatgtaagt
gtgcattcggcaggtattttaattctcgataaatccattcataattattctgcaacattt
ttaccgccaaagggctatcctacggtacagtttgatatgattatagccgaagatgtgggt
atttttaaattcgatattttaggacagcgcggtttggcaaaaattaaggatactttgcaa
attatagcaaaaaacagacccgaattaccgcctattgatattcatgatttaccacgtttt
aaaaatgataaaaaaatcaataacctgcttaaaagcggaggtgctataggagcgtattat
gtagagtctcctgccatgcgcggcttaatgattaaattgcaaacccaagattatttgggg
ctagtagccgcaagttcaataattcgcccaggtgtttcgggctcaggcatgaaagaagaa
tttataaaaagacatcggtttccggaatttcgaaaaaatgcacatcctgttttactcaaa
ataatgcccgatacctatggcattatggtatatcaggaagatgtacttaaagtagcccat
caatttgcaggattaactttgggtgaagccgatgttttgcgcaggggtatgagtggcaag
tatcgctcacgagaggagtttttagctgtagaacaaaaatttatttcaaattgtaaaaac
aaaggctattcggataaattgataaacgaggtttggagccaaataaaaagttttgctggt
tatgcgtttgctaaagggcattcggcatcttatgctgtcgagagttaccaaagcctgttt
ttaaaatgttatttccctattgaatttatggtagcggttttaaataatgggggcgggttt
tacagtaccgagcattatttacacgaggctaaaatgcagggagccaatattaaattgcct
tgtattaactatagcgaccatgctaatagagtaataggtaaagacatttatttaggtttt
gggtatttaaagaacttagaaaaattagtagttcaaagattgcttaccgaaagacaatgg
caaggacattatacatctttagatgattttatcgatcgcgtagccattagcatagagcaa
atatcaattttaatacgcataggttgttttcggtttactggaaaatcgaaaacagaactt
atgtggcaagccatatttaagcttaacgccacaaaatattcaaacaagcaacctaaacta
tttaaaacaaagcacaaacattttgagttacctgttttagaagtaagcgcagttgaaagt
gcttatgacgaaatggaattattagggttcccgttatgtggttattttgatttggtagat
gagcctttggaagatgatatcacatcaatcgacatgagtaattatgcaaacaaagaagta
ataatttatggaaacttggtcaactcaaggtataataaaacctcacaaggaaaattaatg
cgattaagcacatttgttgataaacacggaaaatattttgatgctgtgcattttacagaa
gttgtccataagtatcccatacatgggctaggtatttataagtgccttggtgttatcaca
aaaaaacatggtttctgcagtatgataatttctaaaagtagaaaagttaggataaaaccc
aaccctagggctatcgattag
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