Halopiger xanaduensis: Halxa_0150
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Entry
Halxa_0150 CDS
T01532
Name
(GenBank) putative PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hxa03000
]
Halxa_0150
Transcription factors [BR:
hxa03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halxa_0150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
GAF_2
GAF
PAS
PAS_4
PAS_9
GAF_3
HTH_20
Sigma70_r4
PAS_10
HTH_24
DUF1542
TrmB
Motif
Other DBs
NCBI-ProteinID:
AEH39393
UniProt:
F8DEB1
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All DBs
Position
pHALXA02:complement(136999..138867)
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AA seq
622 aa
AA seq
DB search
MAGQSLTDSLRETLALFDGSGTPRTTAELADDLEIGRRSTYERLERLVEHGELETKRVGA
SARVWWRPRSSAETPDSASNTGIRPIQDRSGSIVGELEQCAICLLDSNGRVRTWNAGAER
ITDSAAGAALDEHISTFYTATDRQADGPEATLETVAETGAVETDQWRVRGDGSTDWAAVT
VEAIRDGSGNLEGFAAVLRDATEQRETERRETVERLRRQREQLEALNTLNDVVREIIDAI
TQRSTREEIERVVCEHLAATESYLFAWIGDVDVTSQTVVGRTEAGVDGYLDGISISVDPN
DERSNGPTGRAILKREIQTTQDIRADDRHDSWRSHIEEYGFRSSAAIPIVHEDTVYGVLN
VYAERPRAFEGRERDVISQLGEVVGHAIAAVERKRALMSDTVVELQFRIRDVFAALDVDT
PTTGTITLDHMVPIEDDEYLVYGSVTADAIDGLESLVETLPHWVSVTYRTGGDERGFELR
LSEPPVLSTVASLGGSVETAVIEGGDYLMTLHAAPGADVRQVVDTVQEAYPDAELLKQRQ
LRVDTPERVRDVLAADLTDRQRAVIEATYHAGFYEWPRDASGKDVAESLAIAPPTFNQHL
RKAHRKVFDSLLSGPDRDRPAD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcaatccttgaccgacagtcttcgggagaccctcgctctcttcgacggctcg
ggaacgccgcggacgaccgcggagctcgctgacgacctcgagatcggtcgccggagcacc
tacgagcgcctcgaacgactcgtcgagcacggtgaactcgagaccaaacgcgtcggcgcg
agcgcccgcgtgtggtggcgtccgcggtcgtcggccgagacccctgattctgcatccaat
acgggaattcggccgattcaggaccggtctgggtcgatcgttggtgaactcgagcagtgc
gcgatctgtctgctcgattcgaacggccgcgtccgcacctggaacgcaggcgccgaacgt
atcacggactccgctgccggcgccgcgctggacgagcacatctcgacgttctacactgca
acggaccgacaggcggacggtcccgaggcgacgctcgagaccgtcgcggaaacgggagcg
gtcgaaacggaccagtggcgcgttcgaggggacggttcgacagactgggcagccgtcacc
gtcgaggcgatccgcgacggcagtggtaaccttgagggattcgcggcggtcctacgggac
gcaaccgagcagcgggagacggagcgccgcgagacggtagagcgactccgccgccagcgc
gagcaactcgaggcgctcaacaccctcaacgatgtcgttcgagagattatcgacgcaatt
acccaacggtcgactcgagaagagatcgagcgggtcgtctgtgagcaccttgccgcgacg
gagtcgtatctcttcgcctggatcggcgacgtcgacgtcacctcccagactgtcgttggg
cggaccgaagccggtgtcgacggctacctcgacggtatctcaatttctgtcgatccgaac
gacgaacggagtaacggtccgacgggaagagcgattctgaaacgcgagatccagaccacg
caggacatccgcgccgacgacaggcacgattcctggcggagccacatcgaggagtacggc
ttccggtcgtcggccgcgataccgatcgtccacgaggatacagtctacggtgtgttgaac
gtctacgcagagcgaccccgagccttcgagggtcgcgaacgagacgtgattagtcaactg
ggggaggtcgtcggtcacgccatcgcggcggtcgaacgcaagcgtgctctgatgagcgac
accgtcgtcgaactccagtttcgaatccgggacgtcttcgctgcactcgatgtcgacaca
ccgacgactggcactatcacgctcgatcacatggtccccatcgaagacgacgagtacctc
gtctatgggagcgtcactgcggacgcgatcgacggactcgagtcgctcgtcgaaacgctc
ccacactgggtgagcgtgacgtaccggactggcggcgacgagcgaggattcgagcttcgt
ctctccgagccaccggtcctgtcgacggttgcgtcgctcggcggttccgtcgagacagcc
gtcatcgagggcggtgactacctgatgacgcttcacgcggcacctggggcagacgtccga
caggtcgtcgataccgtgcaagaagcgtatcccgatgcggagctgctgaaacaacgccaa
ctccgggtcgacacgcccgaacgggtccgcgacgtactcgcggcggatctcaccgaccgt
caacgggcagttatagaagcgacgtatcacgcaggcttctacgagtggccgcgggacgcg
tccggcaaggatgtcgccgaatcgctagccattgccccaccgacgttcaaccagcatctg
cggaaagcccaccgaaaggtgttcgattcgctattgtcgggtcccgatcgtgatcgaccg
gcggactaa
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