KEGG   Halopiger xanaduensis: Halxa_0788
Entry
Halxa_0788        CDS       T01532                                 
Name
(GenBank) Transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
hxa  Halopiger xanaduensis
Pathway
hxa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hxa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Halxa_0788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hxa03021]
    Halxa_0788
Transcription machinery [BR:hxa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Halxa_0788
 Prokaryotic type
  Archaeal type
    TFB
     Halxa_0788
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF A2L_zn_ribbon Trm112p Zn_ribbon_PaaD Zn_Ribbon_YjdM Zn_ribbon_tTFIIB Zn_ribbon_IS1595 Sigma70_r4 Cyclin_C FtrD-like Cyclin_N Lar_restr_allev
Other DBs
NCBI-ProteinID: AEH35427
UniProt: F8D6Z8
LinkDB
Position
99851..100813
AA seq 320 aa
MTRSTRQRERTRETDETEDQEGVRACPECESDNLVKDSDRGELICEDCGLVVEEEKIDPG
PEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVA
TSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDPKKYVPRFCS
ELELSEEVQTKANEIIEKTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIHG
NT seq 963 nt   +upstreamnt  +downstreamnt
atgacacggtccacccgccagcgggagcgaacgcgtgagacggacgagaccgaggatcag
gagggggtacgcgcctgtcccgagtgtgaatcggacaatctcgtcaaggactccgaccgg
ggtgagctcatctgtgaagactgtgggctcgtcgtggaggaagaaaagatcgatccgggc
cctgagtggcgggcgttcaaccaccaggagcgacaggagaagtcccgcgtcggcgccccg
accacccagacgatgcacgacaaggggctgacgacgacgatcgactggaaggacaaggac
gcctacggacgctcgatttcctcgaagaagcgcagccagatgcaccggctgcgcaagtgg
caggagcgcatccgaacgaaagacgccggcgagcgcaacctgcagttcgcgttaagcgag
atcgaccgcatggcctcggcgctcggcgttccgcgttcggtccgcgaggtcgcgtcggtc
atctatcgccgcgccctcaaggaagacctcatccgcggccgctcgatcgagggcgtcgcg
acctcggcgctctacgccgcctgtcggaaggagggcatcccgcgcagcttagaggagatt
tccgaagtctcgcgcgtcgaacgcaaagagatcggtcgtacgtatcgatacatctcgcag
gaactcggcctcgagatgcgacccgtcgacccgaagaagtacgtcccccgtttctgttcc
gaactcgaactgtccgaggaggtccagaccaaggccaacgagatcatcgagaagacggcc
gaggagggtctgctctcgggcaagtcgccgaccggatacgccgccgccgcgatctacgcc
gcgtcgctgctctgtaacgagaagaagacccagcgcgaagtcgccgacgtcgcgcaggtg
accgaagtgacgatccggaaccggtaccaggaacagatcgaagcgatgggcattcacggc
taa

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