Halopiger xanaduensis: Halxa_0930
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Entry
Halxa_0930 CDS
T01532
Name
(GenBank) rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hxa03016
]
Halxa_0930
Enzymes [BR:
hxa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Halxa_0930
Transfer RNA biogenesis [BR:
hxa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Halxa_0930
Prokaryotic type
Halxa_0930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
DUF3701
Motif
Other DBs
NCBI-ProteinID:
AEH35566
UniProt:
F8D8E3
LinkDB
All DBs
Position
complement(235559..236470)
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AA seq
303 aa
AA seq
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MTALRGPPEERSPAELLTFGVVNLDKPPGPSSHQVSGWLRDAVADTLAERGIDATIDQAA
HAGTLDPKVTGCLPIMLGDATRLAQVFLEGSKEYVAVLECHGSLPADAESVVAEFEGPIY
QKPPRKSAVARRLRVREIYDLEVLERNEADRQLLLRIRCESGTYVRKLCHDLGLALGTGG
HMGHLRRTATTPFDDRDLYSAYEFLDALAFWLEDDDPEPLSEIVDPAERILEDIPRVVIP
ESAAREVANGAPVYEPGVLEVDSDVGEGDLVACYTPNGAAVCLGEFVADEGRDVAVDLER
VLV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgctacgtggcccgcccgaggaacgctcgcccgccgaactgcttacgttcggc
gtcgtcaacctcgacaagccgccggggccgtcctcccaccaggtgagcggctggctccgc
gacgccgtcgccgacaccctcgccgaacggggcattgatgcgaccatcgatcaagccgcc
cacgcagggacgctcgatccgaaagtcaccgggtgcctgccgatcatgctcggcgatgcg
acccgcctcgcgcaggtcttcctcgaggggtcgaaggagtacgtcgccgtcctcgagtgt
cacggttcgctcccggccgacgccgagtcggtcgtcgcggagttcgaggggccgatctac
cagaagccgccgcgcaagagcgccgtcgcgcggcgcctccgcgtgcgcgagatttacgac
ctcgaggtgctcgagcgcaacgaggccgatcgccagctgttgctccggatccgctgcgag
agcggcacctacgtgcggaagctttgccacgacctcgggctggcgctcggcacgggcgga
cacatgggccacctgcgacggacggcgacgacgccgttcgacgatcgggatctgtactcg
gcctacgagtttttggacgcgctggcgttctggctcgaggacgacgatcccgaaccgctg
tccgaaatcgtcgatcccgccgaacgcattctggaagacattccgagggtcgtgatcccc
gaaagcgccgctcgggaggtagccaacggcgcaccggtctacgagccgggcgtgctcgag
gtcgacagtgatgtcggtgaaggtgatctcgtcgcctgctacacgccgaatggggctgca
gtctgtctcggcgagtttgtcgccgacgagggacgggacgtggcggttgatctcgagcgc
gtgctcgtgtga
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