Halopiger xanaduensis: Halxa_0943
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Entry
Halxa_0943 CDS
T01532
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_0943
DNA repair and recombination proteins [BR:
hxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Halxa_0943
Archaeal homologous recombinant proteins
Halxa_0943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_27
TPR_MLP1_2
AAA_29
SbcC_Walker_B
ABC_tran
MscS_porin
AAA_15
Exonuc_VII_L
CCDC93_CC
Prefoldin_2
CENP-F_leu_zip
MukB
Fib_alpha
EzrA
DUF4407
Fez1
RsgA_GTPase
DUF5082
Filament
Allexi_40kDa
FliJ
V-SNARE_C
DUF3450
RNA_helicase
AAA_13
AAA_16
AAA_22
AAA_33
AAA
DUF724
Motif
Other DBs
NCBI-ProteinID:
AEH35579
UniProt:
F8D8F6
LinkDB
All DBs
Position
253951..257127
Genome browser
AA seq
1058 aa
AA seq
DB search
MKFERLSLSDFQSYDNLDVTFDDGLTLLHGPNGAGKSTITRALYTTLYPLNGKYKIGAHD
LADLIQDGKDSATSTLVFSVGDERYRITVDISRKGDGRASANAEMTNLESEETYSTKSSE
IEEKVSQLFGMDAEAFANSTYAQQTELTRLIEATPGEREDILDNLLGLTAPDAYEEDINE
MQKTVESWQQDKRSKLQTVQEDIEELEADDPKATVQSKAEEIDDLEARIGDLSDGLEDGR
ERLRAIESDIEEYRERESDLSDLTDERDEAKDTIDDLQSEIDELEAEIQECDEAIAKQRE
RIESRDDEVVDFDLTNEDEAKEAVEEFETKYDEASSEVEQRRAEVDSAEDTVERLEDELQ
SQREELEDAQNRLHAREADVEAAEETLGEAKDSLEQRREILEEQLQDYLETPLDDVDDHE
AAVRDRMDDIREEKSDREAEYESKRDRRARLGDEIDTIESELSEVRERRDDIRESLETAV
DDPEVAFEAAVDRANEAASALGFDVSAEDIDTAFTGDLPDELDAALNDHRDAAEELADAR
ETVGEATAHIEDLQSLAAGKWPLDGGDVGATHDYDTQIQRLESEREEAETAADAAIDTLD
AADERLNHVQEVADALFEAASFKALADVAIEIDDLEAEIEQKQQTRSELQDEMESLEEEI
SRLEEAIAEGETALDTIEDVEDAETAVDEAERELEDARDELADIKEEIGELEAEIEDIES
DLDDAREDVKDAEADLQEAEEQLDEVESARSAAREARDAHAEIATLESDQKGYRSRLDDK
EEQVASKREELQQIEDEIEEVESDLEDTSPDDLKEQQNETETLIEQVESQLEDAQERRDE
ARDAKSKAEERLNRLRDKRERKASLEEQVNWAQTLLNDFETITKTYSEVQTRMRERVLDR
LKRHTNDIFRDLYQNSTYEAVDIDENYDLRLVSGSETARDPNKASGGEGVLVTIALRAGV
YRVLADQAGGRDDSLPPFILDEPTNHLDPTHIDRLEDAVESIRDWDVPQVFVVDRYEGLV
EGADHRIRVERDDGAGASKVVLGDGTGDADDDESEGGD
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgagcgactctccctgagcgacttccagtcctacgacaatctggacgtgaca
ttcgatgacgggttgacgctgcttcacggcccaaacggcgcgggcaagtcgaccatcacg
cgtgcgctgtacaccacgctctaccccctaaacgggaagtacaagatcggcgcacacgac
ctcgccgacctgattcaggacggcaaggacagcgccacctcgacgctggtcttcagcgtg
ggcgacgagcgataccgcatcacggtcgacatctcgcgaaagggagacggcagggcatcg
gcgaacgcggagatgaccaacctcgagagtgaagagacgtactccacgaaatcctcggag
atcgaggagaaagtctcccagctgttcgggatggatgccgaggccttcgccaacagcact
tacgcgcagcagacggagctcacccgcctgatcgaggccacgccgggcgaacgtgaggac
attctcgacaacctgctcggtctgacagctcccgacgcgtacgaggaggacatcaacgag
atgcagaagaccgttgagtcgtggcagcaggacaagcggtcgaagctccagaccgtccaa
gaggacatcgaggaactcgaggccgacgaccccaaggcgaccgtccagtcgaaggccgag
gagatcgacgacctcgaggcacgcatcggtgacctctccgatgggctcgaagatggacgc
gagcggctgcgtgccatcgagagcgacatcgaggagtaccgggaacgggagtcagaccta
tccgacctaaccgacgagcgcgacgaggcgaaggacacaatcgacgacctccagtctgag
atcgacgagctagaggccgaaattcaggagtgtgacgaggccatcgctaagcagcgcgag
cgtatcgagagccgggacgacgaggtggtggacttcgacctgacgaacgaagacgaggcc
aaggaggccgtcgaggaattcgagaccaagtacgacgaggcaagcagtgaggtcgaacag
cggcgggccgaggtcgacagcgccgaggacaccgttgagcgtctcgaagacgaactacag
tcccagcgagaagagttggaggacgcacagaaccgcctccacgctcgagaagccgatgtc
gaggccgctgaggagacgctgggcgaggccaaggactcgctcgagcagcgtcgcgagatc
ctcgaagagcaactgcaggactacctcgagacgccgctcgacgatgtcgatgaccacgag
gccgcggttcgtgaccgcatggacgacatccgcgaggagaagtctgaccgcgaggcggaa
tacgagagcaagcgcgaccggcgtgcccgcctcggcgacgagatcgacacgatcgagtcg
gagctctctgaggtgcgtgagcgtcgcgatgacatccgcgagagcctcgagacagcggtt
gacgacccagaagtggcgttcgaagccgccgtcgaccgagccaacgaggcggcctcggcg
ctcggcttcgacgtgtctgccgaggacatcgacacggcattcaccggtgatctgccggac
gagctggacgccgcacttaacgaccatcgcgacgcggcagaagaactcgccgacgctcgc
gagacagttggagaggccacggcccacatcgaggatctccagtcgctggcggccggcaag
tggcctctcgacgggggtgacgtgggtgcgactcacgactacgacacgcagattcagcgg
ctcgagtcggaacgcgaggaagcggagacggctgccgacgccgcaatcgataccctcgac
gctgcggatgagcggctcaaccacgtacaggaggtcgcggacgctcttttcgaggcagct
agcttcaaggcactcgccgatgtcgccatcgagatcgacgatctagaggccgaaatcgag
cagaagcagcagactcgttccgagctgcaagatgagatggagtcgctggaagaggagatc
agccgtctcgaggaggccatcgcagagggcgagacggcactcgacacaatcgaggacgtc
gaagacgccgagacggccgtcgacgaagccgagcgtgaactcgaggacgcccgcgacgaa
ctggccgacatcaaggaggagattggcgaactggaggccgagatcgaagacatcgagtcc
gacctcgacgacgcccgagaggacgtcaaggacgccgaggccgacctgcaagaggccgag
gaacagttggatgaggtcgaaagtgctcgctcggccgctcgcgaggctcgtgacgcgcac
gccgaaatcgccacactggaaagcgaccagaaggggtaccggtcacgcctcgatgacaag
gaagaacaggtggcgtcgaagcgcgaggaactccagcagattgaggatgaaatcgaggag
gtggaatccgaccttgaagacacatcaccggacgacctgaaagaacagcagaacgagacc
gagacgctgatcgagcaagtagagtcgcagctggaagacgcgcaggagcgtcgcgacgaa
gcacgggatgcgaagagcaaggccgaggagcggctcaaccgtcttcgggacaaacgcgag
cgcaaggcgtccctcgaggagcaggtcaattgggcacagacactgctgaacgacttcgag
acgatcacgaagacgtactcggaggtacagacgcggatgcgcgagcgcgtgctcgatcgg
ctgaagcgccataccaacgacatcttccgcgacctctaccagaacagcacctacgaggcc
gttgacatcgacgagaactacgacctccggctggtcagcggcagcgagacagcccgcgac
ccgaacaaggccagtggcggtgagggagtcctcgtcaccatcgcactccgagcgggcgtc
taccgcgtgctggccgatcaggccggcggccgcgatgacagcctcccgccgttcatcctc
gacgaaccgacgaaccacctcgacccgacccacatcgaccggctggaagacgccgtcgag
agcatccgtgactgggacgtcccgcaggtattcgtcgtcgaccgctacgagggcctcgtc
gagggggccgaccaccgcatccgtgtggagagggacgacggtgccggtgcctcgaaagtc
gtattgggtgacggcacgggcgatgcggacgacgacgagtcggaggggggtgactga
DBGET
integrated database retrieval system
