Halopiger xanaduensis: Halxa_1040
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Entry
Halxa_1040 CDS
T01532
Name
(GenBank) protein synthesis factor GTP-binding protein
KO
K03231
elongation factor 1-alpha
Organism
hxa
Halopiger xanaduensis
Pathway
hxa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Halxa_1040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hxa03019
]
Halxa_1040
03016 Transfer RNA biogenesis [BR:
hxa03016
]
Halxa_1040
03012 Translation factors [BR:
hxa03012
]
Halxa_1040
04131 Membrane trafficking [BR:
hxa04131
]
Halxa_1040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hxa04147
]
Halxa_1040
Messenger RNA biogenesis [BR:
hxa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Halxa_1040
Transfer RNA biogenesis [BR:
hxa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Halxa_1040
Translation factors [BR:
hxa03012
]
Eukaryotic type
Elongation factors
Halxa_1040
Membrane trafficking [BR:
hxa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Halxa_1040
Exosome [BR:
hxa04147
]
Exosomal proteins
Proteins found in most exosomes
Halxa_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
EF-G_D2
GTP-eEF1A_C
RsgA_GTPase
PucR-like_N
DUF2120
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AEH35676
UniProt:
F8D967
LinkDB
All DBs
Position
complement(349961..351562)
Genome browser
AA seq
533 aa
AA seq
DB search
MSRDRALLERALDRGEQDGGNVEFKERLSRDVHLEGGRRESLAAQLRHRLLSGDGEATYV
VGVTDDGGLAGIDPDTFSETMDVLSLLAEEADAHIDDVQTWGVKDGLVGVALIHEGSVLD
TDDEHVVVGTAGHVDHGKSTLVGSLVTGKPDDGDGATRAYLDVQPHEVERGLSADLSYAV
YGFDEDGPVRVRNPNRKADRAAVVEEADRLVSFVDTVGHEPWLRTTIRGLVGQKLDYGLL
VVAADDGPTRTTREHLGVLLATDLPTIVAITKTDAVSEERVEEVEREVERLLREVDKSPL
RVARHGVDAAVEEINERVVPIVETSAITMDGLETLDELFDRLPKTAQDTGEFRMYVDRSY
SVTGVGAVASGTVMSGEVEAGDELLIGPMPDGRFEEVEVRSIEMHYHRVDKAQAGRIVGI
ALKGIQESAIERGMVLLPRDADPEPVREFEAEVMVLNHPTRIGDGYEPVVHLETIGEAAA
FYPEDGRLLPGDTGEATVRFKFRPYLVEEGQKFVFREGRSKGVGTVTDVHPID
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgaccgggccctcctcgagcgggccctggaccgtggcgaacaggacggtggc
aacgtcgagttcaaggaacgcctctcacgggacgtccacctcgagggtgggcgacgcgag
agcctggccgcgcaacttcgacaccgactgctgtcgggcgacggcgaggcgacgtacgtc
gtcggcgtcaccgacgacggcggcctcgccggcatcgatccggacaccttctccgagacg
atggacgtgctctccctgctcgccgaggaggccgacgcgcacatcgacgacgtccagacg
tggggcgtcaaggacgggctcgtcggcgtcgcgttgatccacgagggcagcgtcctcgat
actgacgacgaacacgtcgtcgtcgggacggccggccacgtcgaccacggcaagagcacg
ctcgtcgggtcgctcgtcaccggcaaaccggacgacggcgacggcgccacgcgcgcgtat
ctcgacgtccagccccacgaggtcgaacgcggcctctcggccgacctctcctacgcggtc
tacggcttcgacgaggacgggccggttcgcgtccgaaaccccaatcggaaggccgaccgt
gcggctgtcgtcgaggaggcggaccggctggtctcgttcgtcgacaccgtcggccacgaa
ccctggctgcgtaccacgattcgcggcctcgtcgggcagaaactcgactacgggctgctg
gtcgtcgccgcggacgacggcccgacgcggacgacccgcgaacacctcggcgtcctgctc
gcgaccgatctgcccacgatcgtcgcgatcacgaaaaccgacgcggtcagcgaggagcgc
gtcgaggaggtcgaacgcgaggtcgagcggctgctccgggaggtcgacaaatcgccgctg
cgggtcgcccgccacggcgtcgacgccgccgtcgaggagatcaacgagcgcgtcgtcccc
atcgtcgagaccagcgccatcacgatggacggcctcgagacgctggacgaactgttcgac
cgcctgcccaagaccgcccaggacaccggcgagtttcggatgtacgtcgaccggagctac
tccgtgaccggcgtcggcgcggtcgcctccggcaccgtgatgtccggcgaggtcgaggcc
ggcgacgaactcctcatcgggccgatgcccgacggccgcttcgaggaggtcgaggtgcgc
tcgatcgagatgcactaccaccgcgtcgacaaggcccaggcgggccggatcgtcggcatc
gcgctcaaggggattcaggagagcgccatcgagcgcggcatggtcctgctcccgcgggac
gccgaccccgagcccgtccgagagttcgaggccgaagtcatggttctcaaccatccgacc
cgcatcggcgacggctacgaacccgtcgtccacctcgagacgatcggcgaagccgccgcg
ttctacccggaggacggccggctcctgccgggcgataccggcgaggcgaccgtccgcttc
aagttccggccgtacctcgtcgaggagggccagaagttcgtcttccgcgagggccgcagc
aagggggtcgggaccgtgacggacgttcatccgattgactga
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