Halopiger xanaduensis: Halxa_1067
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Entry
Halxa_1067 CDS
T01532
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hxa
Halopiger xanaduensis
Pathway
hxa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Halxa_1067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hxa03019
]
Halxa_1067
03009 Ribosome biogenesis [BR:
hxa03009
]
Halxa_1067
04131 Membrane trafficking [BR:
hxa04131
]
Halxa_1067
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hxa04147
]
Halxa_1067
Messenger RNA biogenesis [BR:
hxa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Halxa_1067
Ribosome biogenesis [BR:
hxa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Halxa_1067
Membrane trafficking [BR:
hxa04131
]
SNARE
SNARE associated proteins
Others
Halxa_1067
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Halxa_1067
Exosome [BR:
hxa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Halxa_1067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
IstB_IS21
AAA_28
Mg_chelatase
AAA_lid_PRS2_C
AAA_7
AAA_18
AAA_17
ABC_tran
AAA_3
ATPase
DUF815
Sigma54_activat
NB-ARC
Parvo_NS1
AAA_24
AAA_30
TsaE
SLFN-g3_helicase
AAA_11
Vps4_C
PhoH
NACHT
IPT
DUF6985
Motif
Other DBs
NCBI-ProteinID:
AEH35702
UniProt:
F8D989
LinkDB
All DBs
Position
complement(374747..376978)
Genome browser
AA seq
743 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLTLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GREEILQIHTRGMPLSDDVNLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKREDFRGALNEVEPSAMREVLVELPKISWDDVGGLNEAKEQVQESVEW
PLSSPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGGETGSNVSERVVNQLLTELDGLEDMED
VMVIGATNRPDMIDPALLRSGRFDRLVMIGEPDVEGRERILEIHTEDTPLAADVSLREIA
EITDGYVGSDLESIAREAAIEALREDEEADVVEMRHFRQAMENVRPTITEDILDYYERIE
DEFQGGSGGPEPTGRRGSRIGFQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaactggaggttgccaaagcgtacccgaacgactcgggtcgtggtatc
gcccgactcgacccggacacgctgttgcatttgaagctgagtccgggcgacatcatcgag
atcgaaggtgcggacaccaccgccgcgaaggtgtggcgcgccgaccggcaggactggaac
acggacaccgtccgcatcgacggtttcacccggcagaacgccgacgtgggcatcggcgag
cgggtgacgatccggaaggccgaagcgacgaaggccgacaaactcaccctcgcgccgccg
gaggaggcgtcggtccagttcggctcagacgccgccggcatggtcaaacggcagatcctg
aagcggccggtcgtcggccgcgacatcgtccccgtaatgagctcgacgaaccatcccttc
atgcggtccccggggcaggccatcccgctgatcgcggtcgaaacggaaccggaaggggtg
gtcctcatcactgaggacaccgacgtcgaactccgcgaggagcccatttcgggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggactccagagcgagatccagcgg
gtccgggagatggtcgaactcccgatgaagcacccgcagatcttcaagaagctcggcatc
gagccgccgcagggcgtcctcctgcacggcccgccgggcaccgggaagacgctgctcgcg
aaggccgtcgctaacgagacctccgcgagtttcttctccatcgcgggcccggagatcatc
tccaagtactacggcgagtccgaacagcagttacgcgagatcttcgaggacgcgaccgag
gagtcgccgtcgatcatcttcatcgacgaactcgactccatcgcccccaaacgggaggac
gtcaccggcgaggtcgaacgccgcgtcgtcgcccagttgctgaccatgatggacggcctc
gagtcgcgcgggcaggtcatcgtcatcgcggcgaccaaccgcgtcgactcggtcgacccc
gcgctgcgtcgtccgggtcggttcgaccgcgagatcgagatcggcgtccccgacgagacc
ggccgcgaggaaatcctccagatccacacccgcggcatgccgctgtcggacgacgtcaac
ctcggtcacctcgccgacgagacccacggcttcgtcggcgccgacatcgagagcctgacg
aaggaggccgcgatgaaggccctgcggcggtacctccccgagatcgacctcgacgaggag
gacattccgccgagcctgatcgaccggatgatcgtcaagcgcgaagacttccgcggcgcc
ttaaacgaggtggagccgtcggcgatgcgggaggtcctcgtcgaactcccgaagatctcc
tgggacgacgtcggcggcctcaacgaggctaaagagcaggtccaggaatccgtcgagtgg
cccctctcgagccccgagcggttcgaccggctgggcgtcgatccgccggccggggtcctg
ctgtacgggccgccgggcaccgggaagacgctgatggcgaaggccgtcgccaacgagacg
aacgcgaacttcatctcggtgcgcggcccgcagctactctcgaagtgggtcggcgaatcg
gagaaggccatccggcagaccttccgcaaggcccggcaggtctcgccgacggtgatcttc
ttcgacgagctcgacgccctcgcacccggtcgcggcggcggcgagactggttcgaacgtc
tccgagcgggtcgtcaaccagctgctgaccgaactcgacggcctcgaggacatggaggac
gtgatggtcatcggcgcgaccaaccggcccgacatgatcgaccccgcactgttgcgctcg
ggtcggttcgaccgcctcgtgatgatcggcgagcccgacgtcgagggccgcgagcgcatc
ctcgagatccacaccgaggatacgccgctggccgccgacgtctcgctgcgggaaatcgcc
gagatcacggacggctacgtcggcagcgacctcgagtcgatcgcccgcgaggcggcgatc
gaggcgctgcgcgaggacgaggaagcggacgtcgtcgagatgcgccacttccggcaggcg
atggagaacgtccggccgacgatcaccgaggacatcctcgactactacgagcgcatcgag
gacgagttccagggcggctcgggcggcccggaaccgaccggtcgtcgcggcagccggatc
ggcttccagtaa
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