Halopiger xanaduensis: Halxa_1142
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Entry
Halxa_1142 CDS
T01532
Name
(GenBank) DNA topoisomerase type IA zn finger domain protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hxa03032
]
Halxa_1142
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_1142
Enzymes [BR:
hxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Halxa_1142
DNA replication proteins [BR:
hxa03032
]
Prokaryotic type
DNA Topoisomerases
Halxa_1142
DNA repair and recombination proteins [BR:
hxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Halxa_1142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Zn_ribbon_Top1
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEH35775
UniProt:
F8DAH0
LinkDB
All DBs
Position
454931..455719
Genome browser
AA seq
262 aa
AA seq
DB search
MIDDAIRVLAGDCTVITEGTEREEYRGRMTTVVKPDNTVLVHDSDGYQPVAWLTRADSVS
SDRSDGFTLVAKKDAQTLRIAAHEQDGFAHYPVSAAGPRIGTCPDCSGALVRSRGVHCID
CGARYGVPSDATIRNDGHNCDCGLPRMRVERGLAFNVCLDRDCESLDEAVSEAFDREWNC
PEPGCDGDLRILRRGGLIAGCEHYPDCDTGFAMPTGVVDGECACGLPTFETQSGTRCLDA
TCDRVQARALEGEGDPEAVSDD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgacgcgatccgcgtgctcgcgggcgactgcaccgtcatcacggaaggaacg
gagcgcgaggagtaccgcggccgcatgacgacggtcgtcaaacccgacaacaccgtgctc
gtccacgacagcgacggctaccagcccgtcgcgtggctgacccgggccgacagcgtctcg
agcgaccgctcggacggcttcacgctcgtcgcgaagaaggacgcccagacgctgcgcatc
gcggcccacgagcaggacggcttcgcccattacccggtctcggcggcggggccgcggatc
ggcacctgtccggactgttcgggcgcgctcgtacgctcgcggggcgtccactgcatcgac
tgcggcgcgcgctacggcgtgccgtcggacgcgacgatccggaacgatgggcacaactgc
gactgcggcctcccgcggatgcgcgtcgagcgcggcctcgccttcaacgtctgtctcgat
cgcgactgcgagtcgctggacgaggccgtctcggaggcgttcgaccgcgagtggaactgc
cccgaacccggctgcgacggcgacctccgcatcctccggcggggcgggctcatcgccggc
tgcgagcactatcccgactgcgataccggcttcgcgatgccgaccggcgtcgtcgacggc
gagtgcgcctgcgggctcccgaccttcgagacgcaaagcggcacccggtgtctcgacgcg
acctgcgaccgggtgcaggcgcgggcgctcgaaggcgagggcgatcccgaagccgtcagc
gacgattga
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