KEGG   Halopiger xanaduensis: Halxa_1249
Entry
Halxa_1249        CDS       T01532                                 
Name
(GenBank) Replication factor C
  KO
K04801  replication factor C small subunit
Organism
hxa  Halopiger xanaduensis
Pathway
hxa03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hxa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Halxa_1249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hxa03032]
    Halxa_1249
DNA replication proteins [BR:hxa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     Halxa_1249
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 Rep_fac_C AAA_22 AAA_16 RCF1-5-like_lid AAA_18 Sigma54_activat DNAX_ATPase_lid Mg_chelatase AAA_5 nSTAND3 Zeta_toxin AAA_11 NACHT AAA_24 AAA_2 DEAD Sigma54_activ_2 AAA_14 His_Phos_1 IstB_IS21 AAA_33 Rad17 NPHP3_N AAA_19 RuvB_N AAA_28 TsaE AAA_17 TIP49 AAA_30 Metal_resist AAA_7 ABC_tran Lipase_3 RNA_helicase
Other DBs
NCBI-ProteinID: AEH35882
UniProt: F8DBA6
LinkDB
Position
571577..572581
AA seq 334 aa
MDAPLWTDTHAPELAELPQDDVREYLERAVDEPINLLLQGPPGSGKTAAARALAREAHVD
PDNDLIEINVADFFGRTKTEIKNDPRFAQFLVGRSSMSKRDMINRVLKESASYSSVSGEY
KTILLDNAEDVREDFQQALRRIMEQHHRTTQFIVATRQPTKLIPPIRSRCFPVSVRSPTT
DETVAVLERILEAEDVDYDADGLEFVANYADGNLRQAILGAQTTVEDEGELTMNAAYETL
GEVGLDDEIESMLDDAEAGEFTDARSTLDDLLVDEGLDGEEVLDAILRIGRKRYQGEKLA
RIHRLAADIEFELHEGTSDRIHVSHLLAELGRDA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggacgcgccgctgtggaccgatacgcacgctcccgaactggcggagttgccccaggac
gacgttcgcgagtacttagagcgggccgtcgacgaaccgatcaacctcctgctccagggg
ccgcccggcagcgggaagacggcggcggcgcgcgcgctggctcgcgaagcacacgtcgat
ccggacaacgacctgatcgagatcaacgtcgccgacttcttcggccggacgaagaccgag
atcaagaacgacccccggttcgcgcagttcctcgtcggccgctcctcgatgtccaagcga
gacatgatcaaccgcgtgctcaaggagtccgccagctactcgtcggtctcgggcgagtac
aagacgatcctgctggacaacgccgaggacgtccgcgaggacttccagcaggccctgcgc
cggatcatggagcaacaccaccggacgacccagtttatcgtcgccacgcgccagccgacg
aagctgatcccgccgatccgctcgcggtgtttccccgtctccgtccgctcgccgacgacc
gacgagaccgtcgccgtcttagagcgtatcctcgaggccgaggacgtcgactacgacgcc
gacggcctcgagttcgtcgccaactacgcggacggcaacctccgacaggcgattctgggc
gcccagacgaccgtcgaggacgagggcgaactgacgatgaacgcggcctacgagacgctc
ggcgaggtcggtctggacgacgagatcgagtcgatgctcgacgatgccgaggcgggcgag
tttacggacgcccggagcacgctcgacgacctgctcgtcgacgaaggactggacggcgag
gaggtgctcgatgcgattcttcggatcgggcgcaagcgctaccagggcgagaagttggcc
cgcattcatcgactggctgcggacatcgagttcgagttgcacgaggggacgagcgaccgg
atccacgtctcgcacctgctggcggagctagggcgagacgcctga

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