Halopiger xanaduensis: Halxa_1585
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Entry
Halxa_1585 CDS
T01532
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
hxa
Halopiger xanaduensis
Pathway
hxa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halxa_1585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_1585
DNA repair and recombination proteins [BR:
hxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halxa_1585
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Halxa_1585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_30
DUF87
Cofilin_ADF
Motif
Other DBs
NCBI-ProteinID:
AEH36217
UniProt:
F8D7I1
LinkDB
All DBs
Position
893551..895617
Genome browser
AA seq
688 aa
AA seq
DB search
MSDSDSRGPLQPDRPDVDRPFEVDAPFEPAGDQPEAIEQLAEGFRQGMDKQTLLGVTGSG
KTNTVSWVIEEIQKPTLVIAHNKTLAAQLYEEFRNLFPENAVEYFVSYYDYYQPEAYVEQ
TDTYIDKDASINDEIDRLRHSATRSLLTREDVIVVASVSAIYGLGDPRNYVDMSLRLEVG
QEVGRDELLKQLVDLNYERNDVDFTQGTFRVRGDTVEIYPMYGRYAVRVELWGDEIDRMV
KVDPLEGETKGDQQAVLVHPAEHYSIPETKLERAMDEIREDLDSRISYFERKGDMIAAQR
IEERTTFDLEMMQETGYCSGIENYSVYLSDRESGDAPYTLLDYFPDDFLTVVDESHQTLP
QIRGQYAGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEEKTDQTLYVSATPGDYEREHSD
RIAEQIVRPTHLVDPEIEVSEATGQIDDLMDRIDERIERDERTLVTTLTKRMAEDLTEYL
EEAGVDVAYMHDETDTLERHEIIRSLRLGEIDVLVGINLLREGLDIPEVSLVGILDADQE
GFLRSETTLVQTMGRAARNVNGKVVLYADEPSNAMEAAIEETRRRRRIQQEFNEEHGFEP
TTIEKEIGETNLPGSKTDTSEVSGKSLEDEDDAARYVDELEQQMQEAASNLEFELAADIR
DRIREVREEFDLEGGDEDEGIAPPTEEF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactccgattctcgagggcccctccagccggaccgtcccgacgtcgaccggccg
ttcgaggtcgacgcgccgttcgaacccgcgggcgatcagcccgaggcgatcgagcaactg
gccgagggcttccggcaggggatggacaagcagaccctgctgggcgtcaccggctccggg
aagacgaacaccgtctcgtgggtgatcgaggagattcagaagccgacgctggtgatcgcc
cacaacaagacgctcgccgcacagctctacgaggagttccggaacctgttccccgagaac
gccgtcgagtacttcgtctcctactacgactactaccagcccgaagcctacgtcgagcag
accgacacctacatcgacaaggacgcgtcgatcaacgacgagatcgatcgcctgcgccac
tccgccactcgctccctcctgacccgcgaggacgtcatcgtcgtcgcctccgtctccgcc
atctacggcctgggtgacccgcgcaactacgtcgacatgtccctgcgcctcgaggtgggc
caggaggtcggccgcgacgagttactgaaacagctcgtggacctgaactacgagcgcaac
gacgtcgacttcacccagggcaccttccgcgtccggggcgacaccgtcgaaatctacccg
atgtacggccgctacgccgtccgcgtcgaactctggggcgacgagatcgaccgcatggtc
aaggtcgaccccctcgagggcgagaccaaaggcgaccaacaggccgtgctcgtccacccg
gccgagcactactcgattccggagacgaaactcgagcgggcgatggacgagatccgcgag
gacctcgactcccggatctcctacttcgaacggaagggcgacatgatcgccgcccagcgc
atcgaggagcggacgacgttcgatctcgagatgatgcaggagacgggctactgctcgggg
atcgagaattattccgtgtacctctcggaccgcgagtcgggcgacgcaccttacaccctg
ttggactacttccccgacgacttcctgacggtcgtcgacgagtcccaccagacgctgccc
cagatccgcggccagtacgccggcgacaagtcccgcaaggactcgctggtcgagaacggc
ttccgcctccccaccgcgtacgacaaccgcccgctgaccttcgaggagttcgaggagaag
accgaccagacgctgtacgtctcggcgacgccgggcgactacgagcgcgagcacagcgac
cggatcgccgagcagatcgttcgacccacgcacctcgtggaccccgaaatcgaggtgtcc
gaggccaccggccagatcgacgacctgatggaccgcatcgacgagcgcatcgaacgggac
gagcggacgctcgttaccaccctcactaagcggatggccgaggacctcacggagtactta
gaggaggcgggcgtcgacgtcgcctacatgcacgacgagacggacaccctcgagcgccac
gagatcatccgctcgctccggttgggcgagatcgacgtgctcgtggggatcaacctgctg
cgcgaggggctcgacattccggaggtctcgctggtcggcatcctcgacgccgaccaggag
ggcttcctgcgctccgagacgacgctggtccagacgatggggcgcgcggcgcgcaacgtc
aacgggaaggtcgtcctctacgccgacgaaccttcgaacgcgatggaagccgccatcgag
gagacccggcgtcgccggcggatccagcaggagttcaacgaggaacacggcttcgaaccg
accaccatcgagaaggagatcggcgagaccaacctgcccggcagcaagaccgacacctcc
gaggtctccggcaaatcgctcgaggacgaggacgacgccgcccgctacgtcgacgaactc
gagcaacagatgcaggaggccgcgagcaacctcgagttcgagttagctgcggatatccgc
gaccggattcgggaggtccgcgaggagttcgacctcgagggcggcgacgaggacgagggg
atcgcgccgccgaccgaggagttctga
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integrated database retrieval system
