Halopiger xanaduensis: Halxa_1783
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Entry
Halxa_1783 CDS
T01532
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
hxa
Halopiger xanaduensis
Pathway
hxa03030
DNA replication
hxa03420
Nucleotide excision repair
hxa03430
Mismatch repair
hxa03440
Homologous recombination
hxa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Halxa_1783
03420 Nucleotide excision repair
Halxa_1783
03430 Mismatch repair
Halxa_1783
03440 Homologous recombination
Halxa_1783
03460 Fanconi anemia pathway
Halxa_1783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hxa03000
]
Halxa_1783
03032 DNA replication proteins [BR:
hxa03032
]
Halxa_1783
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_1783
Transcription factors [BR:
hxa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Halxa_1783
DNA replication proteins [BR:
hxa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Halxa_1783
DNA repair and recombination proteins [BR:
hxa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Halxa_1783
MMR (mismatch excision repair)
Halxa_1783
DSBR (double strand breaks repair)
HR (homologous recombination)
Halxa_1783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
Ssb-like_OB
CDC24_OB3
OB_MEIOB_N
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEH36411
UniProt:
F8D559
LinkDB
All DBs
Position
1096447..1097934
Genome browser
AA seq
495 aa
AA seq
DB search
MHEHRMSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEVGESEVGG
VADIEPGMEEAKFVAKVLSIGEVRTFERDGEDEDGRVVNVEVADETGSVRAAFWDEHAEA
AIEELEEGQVLRVKGRPKEGFSGVEVSVDEVEPDPDTEVDVQVSDTHTVEDLSLGLSNVN
LVGVVLDTDSVRTFDRDDGSEGKVSNLAVGDETGRVRVTLWDEQADLATELEPGTTVEVV
DGYVKERDGNLELHVGNRGTVEEVDEDVEYVPESTPIEEVEIGQTVDLAGVVRSADPKRT
FDRDDGSEGQVRNIRVQDATDDIRVALWGEKADIDIGPGDEVALGDVEIQDGWQDDLEAS
AGWQSTITVLESDSDAAEAGGDGGAGDANAGLSAFAGDDSGSDDAAAATDTPTDSSASDD
AATDTDTDGTPADDEPTDGEEIEFTGVVVQAGDPVVLDDGETTMSVATEADVGLGEEVTA
RGVVRDGRLEASDVF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagcatagaatgagcgacatcgagggcgtgtacgaggacctcgaggccgacgtc
tctctcgaggagtttcgcgaggccgtcgaggcgaaagtcgagcagatggggggactcgcg
gacgaggagacggcggcgatgctcgtcgctcacgaggtcggcgagagcgaggtcggcggg
gtcgccgacatcgaacccgggatggaggaagcgaagttcgtcgcgaaggtgctctcgatc
ggcgaggttcgtaccttcgagcgcgacggcgaggacgaggacggccgcgtcgtcaacgtc
gaagtcgccgacgaaaccggttccgtccgtgcggccttctgggacgagcacgccgaggcg
gcgatcgaggaactcgaggagggccaggtgctgcgggtcaagggccgtccgaaagagggg
ttctcgggcgtcgaggtcagcgtcgacgaggtggaaccggatccggacaccgaagtcgac
gtgcaggtgtcggacacccacaccgtcgaggacctctcgctcggtctctcgaacgtcaac
ctcgtcggcgtcgtgctcgacaccgacagcgtgcgcacgttcgaccgcgacgacggctcc
gaggggaaggtctcgaacctcgcggtcggcgacgaaaccggccgcgtgcgcgtgacgctg
tgggacgagcaggcggacctcgccacggaactcgagcccggcacgaccgtcgaggtcgtc
gacggctacgtcaaggagcgggacggcaacctcgagcttcacgtcggcaaccgcggcacc
gtcgaggaggtcgacgaagacgtcgagtacgtcccggagagcacgccgatcgaggaggtc
gagatcggccagacggtcgacctcgcgggcgtcgttcgctccgcggatcccaagcggacc
ttcgaccgcgacgacggctccgaagggcaggtccggaacatccgcgtgcaggacgcgacc
gatgacatccgcgtcgccctctggggcgagaaggccgacatcgacatcggtcccggcgac
gaggtcgcgctcggcgacgtcgagatccaggacggctggcaggacgatctcgaggcctcc
gcgggctggcagtcgacgattacggtgcttgagtccgattcggacgcggccgaggcgggc
ggcgacggcggggccggcgacgccaacgcggggctgtcggcgttcgccggcgacgattcc
ggttccgatgatgctgctgccgccaccgacaccccgaccgactcgagtgcgagcgacgac
gcggcgacggacactgataccgatgggactcccgccgatgacgagcccacggacggcgag
gaaatcgagttcaccggcgtcgtcgtccaggccggcgacccggtcgtcttagacgacggc
gagacgaccatgagcgtcgccaccgaggctgacgtcggcctcggcgaggaggtcaccgcc
cggggggtcgtccgcgacggtcgcctcgaggcgagcgacgtcttctga
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