Halopiger xanaduensis: Halxa_1985
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Entry
Halxa_1985 CDS
T01532
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hxa
Halopiger xanaduensis
Pathway
hxa03420
Nucleotide excision repair
hxa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halxa_1985
03430 Mismatch repair
Halxa_1985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_1985
Enzymes [BR:
hxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halxa_1985
DNA repair and recombination proteins [BR:
hxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halxa_1985
MMR (mismatch excision repair)
Other MMR factors
Halxa_1985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
AAA_22
Herpes_ori_bp
AAA_12
CBP_BcsQ
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEH36610
UniProt:
F8D746
LinkDB
All DBs
Position
1307805..1309703
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AA seq
632 aa
AA seq
DB search
MATTETKVTRLFGGPGSGKTTALLDHVEEILDQDGVTFRDILVVSYTRAAAQEVRERLAE
RLDESPRALQGNVCTMHAKAYDLLDLSRSDVIGESEKEEFCEEYGLEFEDEYSGAGRRTA
RSTTIGNKIIATSQWLQRTSRDVSDWYDVPFQWDEEEVRLPPEIDPNAQEGNKYTPTWPS
DDDRIDVPEAIRAWRSYKGEQGKIGFADMLERVKQRSLLPSVDYLVIDEFQDITTLQYDV
YEEWKPHMKQVLIAGDDDQVVYSWQGADPALLLEEAVDEDIILPNSYRLPSNVLNAVNQE
IRHIEKRQDKDLKPRKEGGAVEARANASMLDVVRNVRRTLVETDGSVMVLFRARYQMFQF
IDEFITEGIPFTSLTDQRMWTDRLTQYVRAVEAIDEGEDVTGLQARRLADMLQESAFGTK
ERDDLFDTIDERQEEAGIDDLQELMIPAEVVEDHVPFMPGPASAADMVRKVTNFQKKSVR
SYFAIGEYLGMETDRVRVGTIHSAKGREADHVIVGTDLTEKVVEQMVATVDDPEDVPGVE
EFTKSTSPVPVLTDNERRVFYVGMSRARERLVLLENLVDGAPTLPIDVLLHNKLTDTTLD
ELVEEAQQPSGSDDEDGDDEPEVEPEAGAEAP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacggagacgaaggtgacccggctgttcggtggtccgggaagcgggaagacg
accgcgcttctcgaccacgtcgaagaaatcctcgatcaggacggcgttacgttccgggat
atcctcgtcgtctcgtacacgcgagcggcagcgcaggaggttcgcgaacgactggccgag
cggctcgacgagagtccgcgtgcgctgcagggcaacgtctgtacgatgcacgccaaggcc
tacgatctgctggatctctctcgaagcgacgtcatcggcgaatccgagaaggaagaattc
tgcgaggagtacggcctcgagttcgaggacgagtacagcggcgccggtcgccggaccgcc
cgctcgaccacgatcggaaacaagatcatcgccacgagccagtggctccagcggaccagc
cgcgacgtctccgactggtacgatgtccccttccagtgggacgaggaggaggtccgcctc
ccgcccgagatcgacccgaacgcccaggagggcaacaagtacacgcccacctggcccagc
gacgacgaccggatcgacgtccccgaagcgatccgcgcgtggcgctcctacaagggcgag
cagggcaagatcggcttcgcggacatgctcgagcgcgttaaacaacgctcgttgctcccg
agcgtcgactatctggtgatcgacgagttccaggacatcacgacgctgcagtacgacgtc
tacgaggagtggaaaccccacatgaagcaggtcctgatcgccggcgacgacgaccaggtc
gtctactcctggcagggcgccgaccccgcactgctgctcgaggaagcggtcgacgaggac
atcattctgccgaactcctaccgtctcccctcgaacgtcctcaacgcggtcaaccaagag
atccgccacatcgagaagcgtcaggacaaggacctcaagccgcggaaggaaggcggcgcg
gtcgaggcgcgagcgaacgcctcgatgctggacgtcgtccggaacgttcgacggacgctc
gtcgagacggacggcagcgtgatggtgctgttccgggcgcgctaccagatgttccagttt
atcgacgagttcatcaccgagggcatccccttcacgtcgctgaccgaccagcggatgtgg
accgaccggctcacccagtacgtccgcgccgtcgaggcgatcgacgagggcgaggacgtc
accggcctgcaggctcgccgactcgcggacatgctccaggagtcggccttcggcaccaag
gagcgcgacgacctcttcgacacgatcgacgagcgccaggaagaggccggcatcgacgac
ctccaagaactgatgatccccgccgaggtcgtcgaggaccacgtcccgttcatgcccggt
cccgcgtcggcggccgacatggtccggaaggtaactaacttccagaagaagagcgtccgc
tcgtactttgcgatcggcgagtacctcggcatggagaccgaccgcgtccgcgtcggcact
atccactccgccaagggtcgcgaggccgaccacgtcatcgtcggcaccgacctcaccgag
aaggtcgtcgagcagatggtcgcgaccgtcgacgaccccgaggacgtccccggcgtcgag
gagttcaccaagtcgacctcgcccgtgcccgtcctgacggacaacgaacggcgcgtcttc
tacgtcggcatgtcccgggcccgcgaacggctcgtcctcctcgagaacttagtcgacggc
gcgccgacgctgccgatcgacgttctgctccacaacaaactcacggacacgaccctcgac
gagttagtcgaggaggcgcagcagccgagcgggtccgacgacgaggacggcgacgacgaa
ccggaagtcgaaccggaagcgggtgcggaagcaccgtaa
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