KEGG   Halopiger xanaduensis: Halxa_2548
Entry
Halxa_2548        CDS       T01532                                 
Name
(GenBank) Transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
hxa  Halopiger xanaduensis
Pathway
hxa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hxa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Halxa_2548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hxa03021]
    Halxa_2548
Transcription machinery [BR:hxa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     Halxa_2548
 Prokaryotic type
  Archaeal type
    TFE
     Halxa_2548
SSDB
Motif
Pfam: TFIIE_alpha Rad50_zn_hook Sigma70_r3 DNA_ligase_ZBD DUF7129 Zn_ribbon_6 Zn_ribbon_LysW Zn_ribbon_3 Zn_ribbon_8
Other DBs
NCBI-ProteinID: AEH37166
UniProt: F8DC53
LinkDB
Position
1868758..1869285
AA seq 175 aa
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELDLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYDNIPENLEEEMYRLHDALEERQEYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLESMDNDRLVNAMDERLEALEEELNIDGADA
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcttttgaggacctgctcgaggacccggtcatccagaagtacttgcacgagttggtc
ggtcccaaggggatgcccgtcgcggcggccccgccggacggcgaagtgaccgacgaggag
ctcgccgaggagctcgacctcgagttgaacgacgtgcggcgcgcgctgtttattctctac
gagaacgatctcgccagctaccgccgcctgcgcgacgaggactcgggctggctcacctac
ctctggaccttcgagtacgacaacattccggagaacttagaggaagagatgtaccggctc
cacgacgccttagaggagcgccaggagtacgaacggaaccacgagttctacctctgtgag
atctgttcgatccggttcgagttcggcgaagccatggacttcggcttcgagtgccccgag
tgcggctcgccgctggaatcgatggacaacgaccggctcgtcaacgcgatggacgagcgc
ctcgaggccctcgaggaggaactcaacatcgacggcgcggacgcctaa

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