Halopiger xanaduensis: Halxa_2548
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Entry
Halxa_2548 CDS
T01532
Name
(GenBank) Transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hxa
Halopiger xanaduensis
Pathway
hxa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halxa_2548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hxa03021
]
Halxa_2548
Transcription machinery [BR:
hxa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Halxa_2548
Prokaryotic type
Archaeal type
TFE
Halxa_2548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
Sigma70_r3
DNA_ligase_ZBD
DUF7129
Zn_ribbon_6
Zn_ribbon_LysW
Zn_ribbon_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AEH37166
UniProt:
F8DC53
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All DBs
Position
1868758..1869285
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AA seq
175 aa
AA seq
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MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELDLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYDNIPENLEEEMYRLHDALEERQEYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLESMDNDRLVNAMDERLEALEEELNIDGADA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctcgaggacccggtcatccagaagtacttgcacgagttggtc
ggtcccaaggggatgcccgtcgcggcggccccgccggacggcgaagtgaccgacgaggag
ctcgccgaggagctcgacctcgagttgaacgacgtgcggcgcgcgctgtttattctctac
gagaacgatctcgccagctaccgccgcctgcgcgacgaggactcgggctggctcacctac
ctctggaccttcgagtacgacaacattccggagaacttagaggaagagatgtaccggctc
cacgacgccttagaggagcgccaggagtacgaacggaaccacgagttctacctctgtgag
atctgttcgatccggttcgagttcggcgaagccatggacttcggcttcgagtgccccgag
tgcggctcgccgctggaatcgatggacaacgaccggctcgtcaacgcgatggacgagcgc
ctcgaggccctcgaggaggaactcaacatcgacggcgcggacgcctaa
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