Halopiger xanaduensis: Halxa_2851
Help
Entry
Halxa_2851 CDS
T01532
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hxa03016
]
Halxa_2851
Enzymes [BR:
hxa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Halxa_2851
Transfer RNA biogenesis [BR:
hxa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Halxa_2851
Prokaryotic type
Halxa_2851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Spore_III_AB
Motif
Other DBs
NCBI-ProteinID:
AEH37467
UniProt:
F8D468
LinkDB
All DBs
Position
complement(2175962..2177311)
Genome browser
AA seq
449 aa
AA seq
DB search
MRPAHPTEQAVGMEYYVSDADGVGGHLRDDDDQFRVRELERFDTEPVDADTDAYPHLVVR
ATLRGWDTNDFATRLSDALGVSRERVNWAGTKDKYAVTTQLFSVYGADPEDLPDVNGADI
EVLGRAGRSLEFGDLAGNEFELVVSDPDRPDNAAAITDELREFGGFDGSNGQAVSVGVPN
FFGQQRFGSRRPITHEVGLEIVRDDWEGAVMAYLGRPTDAEPEGTQEARTFVEETRDWQE
ALERFPNRLRYERSMLHELAECDGEPGPEEFRAALERLPSNLQRLFVHAAQSYAFNLMLS
ERLERGLPFDRPVEGDVACFADTDAPEGLVLPDTDRLQRVDERRVGSVTRHCERGRAFVT
APLVGTETDLADGEQGEIERDVLDDLDLEPDDFDLPGEFYSSGTRRAMLVRTDLTLETDP
LSLSFALPKGSYATVVAREFLKVDPIDLG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccagcccaccccacagagcaggccgtcggcatggaatactacgtcagcgacgcc
gacggcgtcggcggccacctgcgcgacgacgacgaccagttccgggtccgcgaactcgag
cggttcgacaccgaacccgtcgacgcggacaccgacgcctacccccacctcgtcgtccgc
gcgacgctgcggggctgggacacgaacgacttcgcgacgcggctctccgacgccctgggc
gtctcccgcgaacgggtcaactgggccggcacgaaggacaagtacgccgtgacgacccag
ctgttctcggtctacggcgccgaccccgaggacttgcccgacgtcaacggcgccgatatc
gaggtgctcggccgggcgggccgctcgctcgagttcggcgacctcgcgggcaacgagttc
gaactcgtcgtgagcgatcccgatcggcccgacaacgccgcggctatcacggacgaactg
cgggagttcggcggcttcgacggctcgaacgggcaagccgtctccgtcggcgtccccaac
ttcttcggccagcagcggttcggcagccggcgcccgatcacccacgaggtcggcctcgag
atcgtccgcgacgactgggagggtgcggtcatggcctacctcggccgtccgaccgacgcg
gaacccgaggggacccaggaagccaggacgttcgtcgaggaaacccgcgactggcaagag
gccctcgagcgattccccaaccgcctgcgctacgagcgctcgatgctccacgaactcgcc
gagtgcgacggcgagcccggccccgaggagttccgggccgcactcgagcgcctgccgtcg
aacctccagcggctgttcgtccacgctgcccagtcgtacgcgttcaacctgatgctctcc
gagcgcctcgagcgcgggctgccgttcgatcggcccgtcgagggtgacgtcgcctgtttc
gccgacaccgacgcgccggaggggctcgtcctccccgacaccgaccggctccagcgggtc
gacgagcgccgcgtcggctcggtgacccgccactgcgaacgcggccgcgcgttcgtcacg
gcgccgctggtcggcaccgagaccgacctcgccgacggcgagcaaggcgagatcgagcgc
gacgtgctcgacgatctggacctcgagcccgacgatttcgacctgcccggcgagttctac
tcgagcgggacccggcgcgcaatgctggtacggacggatctgacgctcgagaccgacccg
ctctcgctgtcgttcgcgctgccgaaggggtcgtacgcgacggtcgtcgcgcgggagttc
ctgaaggtcgatccgatcgatctcggatga
DBGET
integrated database retrieval system
