Halopiger xanaduensis: Halxa_2879
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Entry
Halxa_2879 CDS
T01532
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_2879
DNA repair and recombination proteins [BR:
hxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Halxa_2879
Archaeal homologous recombinant proteins
Halxa_2879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_13
SMC_N
AAA_23
AAA_15
ABC_ATPase
AAA_21
AAA_29
Laminin_II
AAA_27
APG6_N
Knl1_RWD_C
COG6_N
ATG14
Laminin_I
ATG16
CENP-F_leu_zip
Viral_helicase1
DUF1664
FliJ
ABC_tran
NACHT
TPR_MLP1_2
AAA_16
MukB
Motif
Other DBs
NCBI-ProteinID:
AEH37495
UniProt:
F8D490
LinkDB
All DBs
Position
complement(2205223..2207907)
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AA seq
894 aa
AA seq
DB search
MRVDRIRLRNFKCYGDADLGLDRGVTVVHGVNGSGKSTLLEGVFFALYGSKALDDRTLDD
VITTGEEEAEVELWFTHDNRDYHVERHLKLRGDRATTTKCVLETPTETIEGARDVRREVT
ELLRMDAEAFVNCAYVRQGEVNKLIHASPSDRQDMIDDLLQLGALEDYRERASDARLGVK
SVLDGQREVLEDVRKQVERKEDKELHERLNNLESQRAEVTDEIDHYETQREQAQNTLDTA
EDVLERHAETQEEISDLEEGIDDLRSKISETEQQREDAKEQIRELETEREELAEERADLL
ADADLEAANADTDAVEARIEELEARDEELRDDLEEVRVAITETNGEIERLCEEADDLESQ
ADEARTEADDLAERIEGDEDDIADREEKLEDLEDDIETAREQFDDAPIEFGDAAAHLEDL
ESEREDRTDEIGDVTADIRAVENAIEEGERLLEEGNCPTCGQPVKDSPHVDVLDDKREEL
SDLEKQLEELEAERDDLDERIERAEALREAERRVDRLEENRDNVEQLVAEKRESLAERRE
QREDLLEDAEEYESEAEEKREEAAELEDEVAEKREELGEINGERGEIKETLEALRRIAEI
DDEREDLESEIENYRERRRNWQQLNDERRETLSSKRERKRDLESEFDEERVATAREDKQN
AEQYIEKVDAKLEDLEERRTEIQNAIGAVENELEELERLRDRLESLEERCDRLESLYDEA
ETLQTTYGELRSELRQRNVETLERLLNETFELVYQNDSYASIELDGDYRLTVFQKDGEAL
EPEQLSGGERALFNLSLRCAIYRLLAEGVEGTAPMPPLILDEPTVFLDSGHVTQLVSLVE
SMRELGVEQIVVVSHDEELVGAADSLVRVEKDATSNRSRLERGEPPEMELLASD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtcgatcgcatccgcctgcggaatttcaaatgctacggcgacgccgacctcggc
ctcgaccggggcgtcaccgtcgtccacggcgtcaacggcagcggcaagtcgacgctgctc
gagggcgtcttcttcgcgctgtacggttcgaaggcgctggacgaccggaccctcgacgac
gtcattacgaccggcgaggaggaggccgaggtcgaactgtggttcacccacgacaaccgc
gactaccacgtcgagcgccacctgaaactacgcggggatcgggcaacgacgaccaaatgc
gtcctcgagacgcccaccgagacgatcgaaggcgcccgcgacgtgcgccgcgaggtgacc
gaactcctgcggatggacgccgaggcgttcgtcaactgcgcgtacgtccgccagggcgag
gtcaacaagctcatccacgcctcgccgagcgaccgccaggacatgatcgacgacctcctc
cagttgggcgcgctcgaggactaccgcgaacgtgccagcgacgcccgcctcggggtcaag
tcggtgctggacggccagcgcgaggttctcgaggacgtccgcaagcaggtcgagcgcaag
gaggacaaggaacttcacgagcggctgaacaatctggagtctcagcgggccgaggttacc
gacgagatcgaccactacgaaacccagcgcgagcaggcccagaacacgctcgacaccgcc
gaagacgtcctcgagcgccacgccgaaacgcaggaggagatttcggacctcgaggaaggg
atcgacgacctgcggtcgaagatttccgagaccgaacagcagcgcgaggacgcgaaagag
cagatccgcgaactagagaccgagcgcgaggagttagccgaggaacgggccgacctgctc
gcagatgcggacctcgaggctgccaatgccgacaccgacgccgtcgaagcccgcatcgag
gaactcgaggcccgtgacgaagaactgcgggacgacctcgaggaggtccgcgtcgcgatc
acggagaccaacggcgagatcgagcggctctgcgaggaggccgacgacctcgagtcccag
gccgacgaagcgcgcacggaagccgacgacctcgccgagcgcatcgagggcgacgaggac
gacatcgcggaccgcgaagagaaactcgaggacctcgaggacgatatcgaaaccgcccgc
gaacagttcgacgacgcgccgatcgagttcggcgacgccgccgcccacctcgaggacctc
gaaagcgagcgcgaagaccgcactgacgagatcggcgacgttaccgccgacattcgggcc
gtcgaaaacgccatcgaagagggcgaacggctgctcgaggagggcaactgtcccacctgc
ggccagcccgtcaaggactcgccccacgtcgacgtgttggacgacaagcgcgaggaactc
tcggacctcgaaaagcaactcgaggaactcgaggccgaacgcgacgacctcgacgagcgg
atcgagcgcgccgaagccctgcgcgaagcggagcgccgcgtcgatcgactcgaggagaac
cgcgacaacgtcgaacagttagtcgccgagaagcgcgagagcctcgcggagcggcgcgag
cagcgcgaggacctgctcgaggacgccgaggagtacgagagcgaggccgaagaaaaacgc
gaggaggccgccgaactggaggacgaggtcgccgagaagcgcgaagagctcggcgagatc
aacggcgagcgcggcgagatcaaggagacgctcgaggcgctgcgccgcatcgccgagatc
gacgacgagcgagaggatctcgagagcgagatcgagaactaccgcgaacgtcggcggaac
tggcagcaactcaacgacgagcgccgcgagacgctctcgagcaagcgcgagcgcaaacgc
gacctcgagtcggagttcgacgaggagcgcgtcgcaaccgcccgcgaggacaagcaaaac
gcagagcagtacatagagaaggtcgacgcgaaactcgaggacctcgaggaacggcgcacc
gagattcaaaatgcgatcggcgccgtcgaaaacgaactcgaggaactcgagcgtctacgt
gaccggctcgagagcctcgaggaacggtgcgaccgcctcgagtcgctgtacgacgaagcc
gagacgctgcagacgacctacggggagctgcggtcggaactgcgacagcgcaacgtcgag
acgctcgagcgactattaaacgagacgttcgagctggtctaccagaacgactcctacgcc
tcgatcgaactagacggtgactatcgcctgacggtcttccagaaggacggcgaggcgctc
gagcccgaacagctatccggcggtgaacgggccctgttcaatctcagcctgcgatgtgcg
atctaccggctgctcgccgagggcgtcgagggcaccgcgccgatgccgccgctgattctg
gacgagccgacggtcttcctcgactcgggccacgtcacgcaactcgtctccctggtcgag
tcaatgcgcgaactcggcgtcgaacagatcgtcgtcgtcagccacgacgaggaactcgtc
ggcgcggccgactccctggtccgcgtcgagaaggacgccacgtcgaaccgctcgcgactc
gagcgcggcgagccgccggagatggaactcctcgcgtccgactga
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