Halopiger xanaduensis: Halxa_3067
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Entry
Halxa_3067 CDS
T01532
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hxa
Halopiger xanaduensis
Pathway
hxa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halxa_3067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hxa03021
]
Halxa_3067
Transcription machinery [BR:
hxa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Halxa_3067
Prokaryotic type
Archaeal type
TFB
Halxa_3067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DZR_2
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AEH37681
UniProt:
F8D5V5
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All DBs
Position
2403430..2404392
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AA seq
320 aa
AA seq
DB search
MTQSIIGRARNDPQETNAELCPDCETDTIVHDPDRGERVCEECGLVLTEDPIDYGPEWRA
FNAQEHDELSRVGAPLTQSMHDRGLTTTIDWRNKDANGHSMSAEKQGQIHRLRVWQERIR
TKNAGERNLKYALSEIDRMVSALGVPDPVKETASVIYRRALEKDLIRGRSIEGVATSALY
TACRKEDIPRSLEEVTSVSRVDQREIGRTYRYIADELGINLEPTNPRQFVPRFCSELDVG
KDVETKAVEIIDETTEQGLHSGKSPTGFAAAAIYAAGLLCDETIPQRAVAETAQTTVVTV
RNRYREQLEAIDQQPASPST
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacacagtctattatcggtcgcgccagaaacgacccccaggagacgaacgccgaactg
tgtcccgactgcgaaaccgatacgatcgtccacgatccggatcgcggcgagcgcgtctgc
gaggagtgcggactcgtcctgaccgaggacccgatcgattacggccccgagtggcgcgcg
ttcaacgcccaggaacacgacgaactctcgcgcgtgggggccccgttgacccagtcgatg
cacgaccgggggctgacgacgacaatcgactggcgcaacaaggacgcgaacggccactcg
atgtcggccgaaaagcaaggccagattcaccgacttcgggtctggcaggaacggatccga
acgaaaaacgccggcgaacgcaacctcaagtacgccctctcggagatcgaccgcatggtc
agcgcgctcggcgtccccgaccccgtcaaggaaaccgcgagcgtcatctaccgccgcgcc
ctcgagaaggacctcatccgcgggcgctcgatcgagggcgtcgcgaccagtgcgctctac
accgcctgccggaaggaggacatcccgcgcagtttggaggaagtcacgtcggtctcccgc
gtcgaccagcgcgagatcggccggacctaccgctacatcgcggacgaactcggcatcaac
ctcgagccgacgaatccgcgccagttcgtcccgcggttctgctccgagttggacgtcggc
aaggacgtggaaacgaaagccgtcgagatcatcgacgagacgaccgagcagggcctgcac
tcgggcaagtcgccgacggggttcgccgccgcggccatctacgccgcgggcctcctctgc
gacgagacgatcccgcagcgcgccgtcgccgaaaccgcacagacgaccgtcgtcaccgtc
agaaatcggtaccgcgagcaactcgaggcgatcgaccagcagccggcgtcgccgtctaca
tga
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integrated database retrieval system
