Halopiger xanaduensis: Halxa_3086
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Entry
Halxa_3086 CDS
T01532
Name
(GenBank) putative PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hxa03000
]
Halxa_3086
Transcription factors [BR:
hxa03000
]
Prokaryotic type
Helix-turn-helix
Other families
Halxa_3086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_4
HTH_10
PAS
PAS_8
GAF_2
PAS_9
PAS_3
GAF
GAF_3
Sigma70_ECF
Sigma70_r4
HTH_20
Autoind_bind
PAS_11
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AEH37700
UniProt:
F8D5X4
LinkDB
All DBs
Position
complement(2426510..2429824)
Genome browser
AA seq
1104 aa
AA seq
DB search
MSDGATATVGDVVRVLVVGDSPRIDRTVDALAAAFDSAALVRARSVADALERLAETDVHC
LVCEFRADRANADRGNGPSRLERLAARTDAPIVAVADGASADRALEAGATDVVETDDSSA
VVAARVRNAAQRGRLAAETPETDRRARAVLEGSDALVLTVDEDGAITYASPAVESRLGYT
PDELERTAFPRLVHPDDRDGVRDLLAAVAAAPFGSSERRTLRLRDADGRWRLVELTCADR
LADPSIDGLVVTVTAVGLAGRDEGIRAAVDRLPGPVFALGPDWELRYANPAARQFFDGEP
RPGTLVWRLLPETVRETFSSRLREAATTGSTVRFDAAIDDRRLEVLAAPDDDGLTVLARD
VQPPETSAGEPARGRRERDRLDLLESTIDALEDGVAVLEGDTIELANAALLELADATTLV
GREVDALFDDDLAATVRERARSPIVRWMEPITGRLESDAAAESSESGGLEAGDGRPVDVF
VAPLPDDERERTLCVVRDRRRSGAAALSSVRDALADLARAETEADVRRAVVDGLRAAADA
ELAAWYLVDEDRLRPAAMTTRDGRPAVELPPIERDPPAFDDGDRDESSAGASADPFAVDE
PTVYDRSALEPALARSGIRAERVLAVPVDDRAVALATSTEPMAFEALDLDAPAALADAAS
LALDRLAERARARDCRRDRTRLESALARDEQLRACERDLLAAETREGVERRLCDGVLSLS
SADDGNRDRDGGGVELAWIGRTAAGRETLIAATWAGRDGEFLESASLPLESDADDPAVRT
ATSREPTIVDDLEAVATADVHREALERGFRAALSVPIEHDEFQYGTLTAYATRPAAFDED
LRDACTHLASVAGHAIGALERKRALLADSVAELEIVVRDESEPLSAIARGVGGRIDVRTV
VPRTSGGSTVYCTVADADAETIRTTLEGISAVESFREVGDEDDGDDGDDANGGTGGNRAP
FEIRLSESTVAETLAEYGGVLRSIAPVDDRARLVIELASTVDVRSFVRTIERTHPGTELA
ARRERDRSVPPARPFDAELRDRLSDRQLRTLEAAYYGGFFDWPRESTGEEVAETLGVSQP
TFSRHLRLAQHKLFELLFDERDEE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacggcgctaccgcgacggtcggcgacgtcgttcgcgtgctcgtcgtcggcgac
tcgcctcggatcgaccgcacggtggacgctctcgccgcggcgttcgattcggccgcgctg
gtcagggcacggtcggttgcggacgcactcgagcgcctggccgaaaccgacgttcactgt
ctcgtctgcgagtttcgggccgaccgcgctaacgcggaccgcgggaatggcccctcccgg
ctcgagcgcctcgcggcacgaaccgacgcgcccatcgtcgccgtcgcggacggcgcgtcg
gccgaccgggcgctcgaggccggcgcgaccgacgtcgtcgaaaccgacgactcgagcgcc
gtcgtcgcggctcgcgttcgaaacgccgcacagcgcggccgactcgccgccgagacgccc
gagacggaccggcgcgcccgcgccgtcctcgaggggtccgacgcgctcgtgttgaccgtc
gacgaggacggtgcgatcacgtacgcgagccccgccgtcgagtcgcggctggggtacacg
ccggacgaactcgagcgcaccgcgttcccccggctcgtccatcccgacgaccgcgacggc
gttcgagacctgctcgctgccgtcgcggcggcgccgttcggctcgagcgagcgacggacg
ctgcggctgcgcgacgccgacgggcggtggcggctcgtcgaactgacctgtgccgatcgc
ctcgcggacccgtcgatcgacgggctcgtcgtcaccgtcactgccgtcggcctcgccgga
cgtgacgagggcattcgagcagcggtcgaccgcctcccgggaccggtgttcgcgctcgga
cccgactgggagctccggtacgcgaacccggcggcgcggcagttcttcgacggcgagccg
cggccggggaccctcgtctggcgtctgctgccggaaacggtccgtgaaacgttttccagt
cggcttcgggaggccgcgacgaccggatcgaccgtccggttcgacgcggcgatcgacgac
cgccggctcgaggtgctggccgcacccgacgacgacgggctgacggtcctcgctcgcgac
gtgcagccacccgagacgtcggcgggcgagccggcgcggggacggcgggagcgcgaccgc
ctcgacctcctcgagtcgacgatcgacgcgctcgaggacggggtggccgtcctcgagggc
gacacgatcgaactggcgaacgcggcgctgctcgaactcgccgacgcgacgacgctcgtc
ggccgggaggtcgacgcgctgttcgacgacgatctcgcggcgacggttcgcgagcgcgca
cgctcgccgatcgttcgctggatggaaccgatcaccggacggctcgagtcggacgcggcg
gcagagtcgagcgagtccggcggtctcgaggcgggagacggacggcccgtcgacgtcttc
gtcgcgccgctgcccgacgacgagcgagagcggacgctctgcgtcgtccgcgaccgacgt
cggtccggggccgccgcgctctcgtccgttcgggacgcgctcgccgacctggctcgcgcg
gagaccgaggcggacgtccgccgggccgtcgtcgacgggcttcgcgccgccgccgacgcc
gagttggctgcctggtacctcgtcgacgaagaccgactcaggcccgcggcgatgacgacc
cgcgacggacggccggcggtcgaactcccgccgatcgagcgggacccgccggcgttcgac
gacggcgatcgcgacgagagcagtgctggcgcgagcgcggaccccttcgccgtcgacgag
ccgaccgtctacgaccgctcggcgctcgagccggcgctggcccgctccggaatccgggcc
gagcgcgtgctcgccgtcccggtcgacgaccgcgcggtcgcgctggcgaccagcaccgag
ccgatggccttcgaggcgctggatctcgacgccccggccgcgctcgcggacgcggcgtcg
ctcgccctcgaccggctcgcggagcgggcccgcgctcgcgactgccgccgcgaccgcacg
cgtctcgagtcggctctcgcccgcgacgagcaactccgggcgtgcgagcgcgacctgctc
gcggcggagactcgcgagggggtcgaacggcgcctctgcgacggcgtgctgtcgctctcg
tccgcggacgatggcaaccgcgaccgcgacggcggcggcgtcgaactggcgtggatcggc
cgaaccgctgcgggccgcgagacgctgatcgccgcgacgtgggccggtcgcgacggcgag
ttcctcgagtcggcgtcgctcccgctcgagtcggatgcagacgatccggccgtccggact
gcgacgagccgcgagccgacgatcgtcgacgatctcgaagcggtcgccaccgccgacgtg
caccgcgaggcgctcgagcggggcttccgcgcggcgctgagcgtcccgatcgagcacgac
gagttccagtacgggacgctgaccgcgtacgcgacccggccggcggcgttcgacgaggac
ctgcgggacgcttgtacgcacctcgcgagcgtcgccggccacgcgatcggcgcgctcgag
cgcaagcgcgccctgctcgccgacagcgtcgccgaactcgagatcgtcgtccgcgacgag
tccgagccgctgtccgcgatcgctcgcggcgtcggcggtcggatcgacgtccggacggtc
gtcccgcggacgtcgggcggctcgacggtgtactgcacggtcgccgacgccgacgcggag
acgattcggacgacgctcgaggggatttcggcagtcgagtcgtttcgggaggtcggcgac
gaagacgacggggatgacggggatgacgcaaatggcggaaccggcggcaatcgcgcaccc
ttcgaaatccgtttgtccgagtcgaccgtcgcggaaaccctcgcggagtacggcggcgtg
ttgcgctcgatcgcgccggtcgacgaccgggcccgactcgtgatcgaactcgcgagcacg
gtcgacgtgcgctcgttcgtccgcacgatcgagcgcacccatccggggacggaactggcc
gcgcgccgcgagcgagatcggtccgtcccgcccgcgcgcccgttcgacgccgaactccgc
gaccgcctttcggatcgacagttgcgaacgctcgaggccgcctactacggcggcttcttc
gactggccccgcgagagcaccggcgaggaggtcgccgaaacgctgggggtctcccagccg
acgttcagccgccaccttcggctggcccagcacaagctgttcgaactgttgttcgacgag
cgggatgaggagtga
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