Halopiger xanaduensis: Halxa_3284
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Entry
Halxa_3284 CDS
T01532
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hxa
Halopiger xanaduensis
Pathway
hxa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halxa_3284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hxa03021
]
Halxa_3284
Transcription machinery [BR:
hxa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Halxa_3284
Prokaryotic type
Archaeal type
TFB
Halxa_3284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_Tnp_ISL3
Trm112p
YopD
DNA_ligase_ZBD
DZR
DUF8054_C
Zn_ribbon_LysW
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AEH37896
UniProt:
F8D7G9
LinkDB
All DBs
Position
complement(2615986..2616963)
Genome browser
AA seq
325 aa
AA seq
DB search
MTDTSIRTRSDEQRQGTQEESHEQAGEREQCPECGGRLVSDAEHAETVCDDCGLVVDEGE
IDRGPEWRAFDAAEKDEKSRVGAPTTNMMHDQGLSTNIGWQDKDAYGRSLSSRQRQKMQR
LRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPGRSI
EGVSTASLYAAARQAGTPRSLDEIDAVSRVEKDEIARTYRYVIRELGLEVQPADPESYVP
RFASDLDLPDETERRARQLLKTAKDSGIHSGKSPVGLAAAAVYAGALLTNEKVTQNDVSE
VANISEVTIRNRYHELLEAEEAAPA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccagtattcgaactcgcagcgacgagcaacgccagggcacccaggaggag
tcgcacgagcaggcgggcgaacgggaacagtgtccggagtgtggcggtcgactcgtctcg
gacgccgagcacgccgaaacggtctgcgacgattgcggtctcgtcgtcgacgaaggcgaa
atcgaccgcgggcccgagtggcgggccttcgacgccgccgagaaggacgagaagtcccgc
gtcggcgccccgacgaccaacatgatgcacgatcaggggctctcgaccaacatcggctgg
caggacaaggacgcctacggccgctccctctcgagccgccagcgccagaagatgcagcgc
cttcgcacctggaacgagcggttccgcacccgcgactccaaggagcgcaacttaaagcag
gcgctgggcgaaatcgaccggatggcctccgcgctcggcctccccgagaacgtccgcgaa
acggccagcgtgatctaccgccgcgccctcgaggaggacctccttcccggacggtcgatc
gaaggcgtctcgacggcctcgctgtacgccgccgcccggcaggccggcaccccgcgcagc
ttagacgagatcgacgcggtctcccgcgtcgagaaggacgagatcgcccgcacctaccgc
tacgtcatccgggaactgggcctcgaggtccagccggccgaccccgagagctacgtgccc
cgcttcgcgagcgatctcgacctccccgacgagaccgagcgccgcgcccgacagctgctc
aagacggccaaggactcgggcattcacagcggcaagtcgccggtcggcctcgcggccgcc
gcggtctacgccggcgcgctcctgacgaacgaaaaggtcacgcagaacgacgtcagcgag
gtcgcgaacatctccgaagtgacgatccgcaaccggtaccacgaactcctcgaggccgag
gaagccgcaccggcctga
DBGET
integrated database retrieval system
