Halopiger xanaduensis: Halxa_3807
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Entry
Halxa_3807 CDS
T01532
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_3807
Enzymes [BR:
hxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halxa_3807
DNA repair and recombination proteins [BR:
hxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Halxa_3807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
UCH_UBL1
Motif
Other DBs
NCBI-ProteinID:
AEH38413
UniProt:
F8DCF3
LinkDB
All DBs
Position
complement(3149536..3153297)
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AA seq
1253 aa
AA seq
DB search
MAEDTERRDVTAEAGLEPKGNQRAVIDSDAACISVDAGAGTGKTTTMLMRIEHAIENGDV
DPDDVLVLTFANEAAGSIRDAVAERLDPETAAAIDVYTYHSFCYRLVREYAYSLGYSPEF
EIVTEHTRRRIVGRLLATNDYGFAASPERNGPRSDLTDAVDDFIRTMSQEDVTPERLRAG
LPDVRTIELCNEFVLWLERRAGRNLSFDNEGLRYFNRDEHLETARESLVGYGKLVEYCRE
KIAESPEPFREDDVVQDVDRYLRVLQTCVTETIEALSLEEPTTKQLPRALFGNEIWRQKT
ERIEQSPFGRLKHYVEFLRLARHYADVYADYHETLAEERALDFDELVRTATELLDDEAIA
DEITGQWEQVYCDEFQDTDETQFGLITELTGGPDRPNLLAIGDKDQAIYGWRGTDREGLD
RLADEYDDHESIELELNFRSRQEILDLTNYCDYGLQSSKTLREVDRDRGENADDTAEPVD
RVVKVESADIPESTADQVATTVSRLLNGEAETVPQRSLEDVAVIVRTNRHAQAVADELRE
RRIPYEISGSPRGEISPGIRTVLSYLRALVDPDADVHLRRVLLYRYRLSEGDLRTLQERR
RGREGSLYDAVFDIDPDDLENPGRLETARDHLEELATLRDVYPLSGFVRRFRDLTRLEWF
LTDEERAELDHLDRFVERYDPETVVGTLTPEFVDALERTLRGGGSERTRGTQSSDSIDVM
TVHQAKGLEFDTVLVPYLSDEEWCVESDYAQRAQERLLAATLDDEVDSPLLADLAAETVA
EEWRVLHVALTRAENHLFVFGAEYDYDGGEEELGVSTADACLAADIEWSTAGQRMNLWSS
LTESFERVQTQYPETVADRTDEIARSADVTPGSITYYSDYDDRDVEPLETREAIETVHQL
GRLLRDGTLLPAADAASHGDGNVRESIRLPSGRQPSALTTDTVRFPVETLSDATELPVAM
RHSYSAMETHDTCPRKHYLEHVVTAIDDPLPLGTVDSPDENAASGSRIVGTVFHDVAEEA
FYRDYETRAEWREAAVRHLTARDLLEHREPVLACIDRYFEATAAAFGRPVAEWEPLAAEV
PFSLSSVDGVAGDVIGYVDSIRRLPAEVTADANAGLTRTQERAGDLAVLDYKTTAERIDP
DSAVQLALYARACERRFDDPIGAVGYVYVGDLEGADANTANEPRVELFDPDDLPPWSSVR
ETLEAVDDPSYLETTPGEHCQYCPHRSLGCAPDEYLEIEDGTAGLESRSLTDD
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagacaccgagcgacgagacgtcacagcagaagcgggcctcgagccgaagggc
aaccagcgggcggtcatcgacagcgacgcggcctgtatctccgtcgacgcgggcgccggc
accgggaagacgacgacgatgctcatgcggatcgagcacgccatcgagaacggcgacgtc
gatccggacgacgtgctggtgcttaccttcgcgaacgaggcggccggcagcatccgcgac
gccgtcgccgagcggctcgacccggagaccgcggcggccatcgacgtctacacgtaccac
tcgttttgctaccggctcgtccgcgagtacgcctactccctcggctactcgccggagttc
gagatcgtcaccgagcacacgcgccgccggatcgtcggccgcctgctcgcgacgaacgac
tacggcttcgcggcctcgcccgagcgcaacggaccccggtcggacctcaccgacgccgtc
gacgacttcatccggacgatgagccaagaggacgtcacccccgagcgactccgtgcgggg
ctccctgacgtgcggacgatcgaactctgcaacgagttcgtcctctggctcgagcgccgc
gccggtcggaacctctccttcgacaacgagggcctgcgatacttcaaccgcgacgagcac
ctcgagacggcccgcgagtcgctggtcggctacgggaaactcgtcgagtactgccgcgag
aagatcgccgagtcgcccgaaccgttccgcgaggacgacgtcgtgcaggacgtcgaccgc
tacctgcgggtcctccagacctgcgtgaccgagaccatcgaggcgctctcgctcgaggag
ccgacgacaaaacagctgccgcgggcgctgttcggcaacgagatctggcggcagaaaacg
gagcgcatagagcagagcccgttcggccggctgaaacactacgtcgagttcctccggctg
gcgcgccactacgccgacgtctacgcggactaccacgaaaccctcgccgaggagcgggcg
ctggatttcgacgaactggtgcggacggccacggagttgctggacgacgaggcgatcgcc
gacgagatcaccggtcagtgggaacaggtctactgcgacgagttccaggacaccgacgag
acgcagttcggcctcatcaccgaactgaccggcggccccgaccggccgaacctgctcgcg
atcggcgacaaggatcaggcgatctacggctggcggggcaccgaccgcgaggggctggat
cggctcgccgacgagtacgacgaccacgagtcgatcgaactcgagctcaacttccgctcg
cgccaggagattctcgatctcacgaactactgcgattacgggctccagtcctcgaagacg
ctgcgcgaggtcgatcgggatcgcggcgagaacgcggacgacaccgcggagcccgtcgac
cgcgtcgtcaaagtcgagagcgccgacatccccgagtcgacggccgaccaggtcgcgacg
accgtctcgaggctgctcaacggcgaagccgaaaccgttccccagcggagcctcgaggac
gtcgcggtcatcgtccggacgaaccgccacgcgcaggcggtcgcggacgaactccgggag
cggcggatcccctacgagatttccggctcgccgcggggcgagatttcgcccggcattcgg
acggtactctcctacctccgcgcgctcgtcgatccggacgcagacgtccacctccggcgg
gtgctgctgtatcgctaccggctctcggagggggacctgagaacgctgcaggagcggcgt
cggggacgcgagggatcgctctacgacgccgtctttgatatcgatcccgacgacctcgaa
aaccccggccgcctcgagacggcgcgcgaccacctcgaggaactcgcgacgctgcgggac
gtctacccgctctcgggctttgtccgccggttccgcgatctgacgcggctcgagtggttc
ctcacggacgaggagcgagcggaactcgatcacctcgaccggttcgtcgagcgctacgat
cccgagaccgtcgtcggcacgctgacgcccgaatttgtcgacgcgttagagcgaacgctt
cgaggcggcggcagcgaacggacgcggggcacgcagtcgtcggactcgatcgacgtgatg
accgtccaccaggcgaagggcctcgagttcgacacggtgctcgtcccctacctctccgac
gaggagtggtgcgtcgagtcggactacgcccaacgcgcacaggagcggttgctcgcggcg
accctcgacgacgaggtcgactcgccgctactcgcggatctggccgccgagaccgtcgcg
gaggagtggcgcgtcctccacgtcgcgctgactcgagccgagaaccacctgttcgtcttc
ggcgccgagtacgactacgacggcggcgaggaggaactgggcgtctcgacggccgacgct
tgcctcgcggccgacatcgagtggtcgaccgccggccagcggatgaacctctggtcgtcg
ctgaccgagagcttcgagcgggtccagacgcagtaccccgagacggtcgccgatcgaacc
gacgaaatcgcccgctccgccgacgtgaccccgggctcgatcacctactacagcgactac
gacgaccgggacgtcgaaccgctcgagacgcgcgaggcgatcgaaaccgtccaccagctt
gggcggctgttacgcgatgggacactactcccagcggccgacgccgccagccacggcgac
gggaacgtgcgcgagtccatccggctgccgagcggtcgccagccctcggcgttgacgacc
gataccgtccggttcccggttgaaacgctctcggacgcgaccgaactcccggttgcgatg
cgccacagctacagcgcgatggagacccacgacacctgtccgcgaaagcactacctcgag
cacgtcgtgacggcgatcgacgatccgctacccctcgggacggtcgattcgccggacgag
aacgcggccagcggctcgcggatcgtcggcacggtcttccacgacgtcgccgaagaggcg
ttctaccgagactacgagacgcgcgccgagtggcgcgaggccgccgttcgacacctgacc
gcgcgggatctactcgagcaccgcgagccggtgctggcctgcatcgaccggtacttcgag
gcgacggcggccgcgttcggccggccggtcgcggagtgggaaccgctcgcggccgaggtg
ccgttctcgctgtcgtcggtcgacggcgtagcgggggacgtgatcgggtacgtggactcg
attcggcggctgcccgcggaagtgaccgccgacgcgaatgcaggactgacgcggacacaa
gagcgagccggcgacctcgccgtcctcgactacaagacgacggccgaacggatcgacccc
gacagcgcggtccagttggcgctgtacgcccgagcctgcgagcggcgcttcgacgacccg
atcggcgccgtcggctacgtctacgtcggcgatctcgagggcgcggacgcgaatactgcc
aacgaaccgcgcgtcgaactgttcgaccccgacgacctccccccgtggtcgagcgtccgc
gagacgctcgaggccgtcgacgatccgtcctacctcgagacgacgccgggcgagcactgt
cagtactgtccgcatcggtcgctcggttgtgcgcccgacgagtacctcgagatagaagac
gggacggccggcctcgagtcgcgatcgctgaccgacgattga
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