Halopiger xanaduensis: Halxa_4286
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Entry
Halxa_4286 CDS
T01532
Name
(GenBank) biosynthesis docking scaffold protein, SagD family
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hxa03009
]
Halxa_4286
Ribosome biogenesis [BR:
hxa03009
]
Prokaryotic type
ribosomal protein modification factors
Halxa_4286
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AEH38888
UniProt:
F8D628
LinkDB
All DBs
Position
complement(3640250..3642028)
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AA seq
592 aa
AA seq
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MQVHVVGDDPVREAVVAALGDVDIDVADAEPADLTDARFGVVSGVVGSDAFERANEAARA
GSTPWIAVEIGGVGGYPLSSVDAAASGFAPGAGTGCFDCLRARVASNLEEGETADGPQAD
RAAARLAGAVAGRECVRVFSGEDESIIGRVVELPHARRRLLPVPGCECADSERDRTLERD
DDSLALDSAVDHAEAAIDDRVGVVASIGEVESFPVPYYLATNANTTAFSDASAPRQAAGV
ADDWNAALMKAVGEGLERYCAGVYRDAEFVRASEGDLENPVSPTDLVRPDDASEYDPAEE
YRWVPGENLVTGGRAHLPAAAVQFPQPGAELVPAITTGLGLGSSTVDALLSGLTEVLERD
ATMLAWYSTFEPLELAVDDPAFATLERRARSEGLSVTPLLVTQDVDVPVVAVAVHREPDD
LDADAEIDPEDDAWPAFAAGSAADLDATAAATAALEEALQNWMELRNLGPEEAADQSGAI
GEYAAFPTPAQEFVAVGGDRVPAESVGPDPVPSGEDALESLLERAGDADLTPYAARLTTR
DVESIGFEAVRVVVPGAQPLFTGEPFFGDRARTVPDELGFESRLERAFHPYP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccacgtcgtcggcgacgatccggtccgcgaggccgtcgtcgccgcgctggga
gacgtcgatatcgacgtcgcggacgccgagcccgccgatctcaccgacgcccggttcggc
gtcgtcagcggcgtcgttggctcggacgcgttcgaacgggcgaacgaagccgctcgagcg
gggtcgacgccctggatcgccgtcgagatcggcggcgtcggcggctaccccctgtcgtcc
gtcgacgccgcggcgtccgggttcgcgccgggcgcgggaaccggctgtttcgactgtctt
cgcgctcgcgtcgcgtcgaacctcgaggagggagaaaccgcggacgggccgcaagccgat
cgcgccgcggcccgtctcgccggcgcggtcgccggccgggagtgcgtgcgcgtcttctcc
ggcgaggacgagtcgattatcgggcgcgtcgtcgaactcccacacgcccgacgacgcctc
cttccggtccccggctgtgagtgtgcggacagcgagcgggatcggacgctcgagcgagac
gacgactcccttgccctcgattcggccgtcgaccacgcggaggcggccatcgacgaccgc
gtcggcgtcgtcgcgagcatcggcgaggtcgagtcgttccccgtcccctactacctggcg
acgaacgcgaacacgaccgccttcagcgacgccagcgcgccgcgccaggccgccggggtc
gccgacgactggaacgccgcgctgatgaaggccgtcggcgagggcctcgagcggtactgc
gccggcgtctaccgcgacgcggagttcgtccgcgccagcgagggcgacctcgagaacccc
gtctcgccgaccgacctcgtccggccggacgacgcgtccgagtacgacccggccgaggag
taccgctgggttcccggcgagaacctcgtcaccggcgggcgggcccacctccccgcggcg
gccgtgcagttcccccagcccggcgcggaactcgtccccgcgatcacgaccggactcgga
ctgggctcctcgacggtcgacgcgctgctgtccggcctgacggaggtcctcgagcgcgac
gcgacgatgctcgcgtggtactcgacgttcgaaccgctcgaactcgccgtcgacgacccc
gcgttcgcgacgctcgagcgccgcgcgcgaagcgaaggcctgtcggtgacgccgctgctg
gtcacgcaggacgtggacgtaccggtggtcgcagtcgcggttcaccgggagccggacgat
ctcgacgcggacgcagaaatcgaccccgaagacgacgcctggcccgccttcgcggccggt
tccgcggccgacctcgacgcgacggccgccgcgacggcggcgctcgaggaggccctccag
aactggatggaactgcggaatctcggccccgaggaggcggccgatcagtcgggcgcgatc
ggggagtacgccgcgttcccgacgccagcacaagaattcgtcgccgttggcggcgatcgg
gtgccggccgagagcgtcggtcccgacccggttccgtcgggcgaggacgccctcgagtcg
ctgctcgagcgcgcgggcgacgccgacctgacgccgtacgcggcgcggctcacgacccgc
gacgtcgagtcgatcggcttcgaggcggtccgggtcgtcgtccccggcgcgcagccgctg
ttcacgggcgagccgttcttcggcgacagagcgcggacggtgccggacgagttggggttc
gaatctcgcctcgagcgggcgttccacccgtacccctga
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