KEGG   Halosquirtibacter xylanolyticus: K5X82_04135
Entry
K5X82_04135       CDS       T10547                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
hxy  Halosquirtibacter xylanolyticus
Pathway
hxy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hxy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K5X82_04135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hxy03021]
    K5X82_04135
Transcription machinery [BR:hxy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K5X82_04135
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE Sigma70_ECF HTH_23 HTH_10 DUF7083 HTH_71 HTH_11 HTH_40 PPV_E1_N HTH_Crp_2 PhyR_sigma-like
Other DBs
NCBI-ProteinID: QZT38094
LinkDB
Position
complement(1214123..1214671)
AA seq 182 aa
MNKQNDIDSITLGCLALGSEGALRKIIKRYNDDLMRYAFSLLKDREMAEEVVSEVFISFW
SNRKRMKDIIHLKRYLVVSVRNKSLSELSKKRILTSSEENNEMYQLYSDHRSIEDDWISK
EFYEFVMQKIDFLPQRCKEVLVMAKINGLKQYEIAEILSISPKTVENTLARALKKLHESV
GI
NT seq 549 nt   +upstreamnt  +downstreamnt
atgaataaacaaaatgatattgactccattacattggggtgtttagcactaggttctgag
ggtgctttacgaaaaataataaaaagatataatgatgatttgatgcgatatgctttttct
ctattgaaggatcgagagatggcagaggaggtagtaagtgaagtttttattagtttttgg
tccaatcgaaaaaggatgaaagacattatccatctcaagagatatttagtggtctctgta
agaaacaaatctttatcagaattgtcaaagaaacgaatattaacctcttctgaagaaaat
aatgaaatgtatcaactgtatagtgatcatcgttctattgaagatgattggatctccaaa
gagttttatgagtttgtgatgcagaaaattgattttcttccacagcgttgcaaggaagtt
ttagttatggcaaaaattaatgggttgaaacaatatgaaattgcggagatattgtcaatt
tctcctaagacagttgaaaatacattggctagagcattaaaaaagcttcatgaatcggtt
ggtatttag

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