Halosquirtibacter xylanolyticus: K5X82_04390
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Entry
K5X82_04390 CDS
T10547
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hxy Halosquirtibacter xylanolyticus
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxy03400
]
K5X82_04390 (sbcD)
DNA repair and recombination proteins [BR:
hxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K5X82_04390 (sbcD)
Archaeal homologous recombinant proteins
K5X82_04390 (sbcD)
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Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
PS_pyruv_trans
DUF4878
Motif
Other DBs
NCBI-ProteinID:
QZT38143
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Position
1293348..1294574
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AA seq
408 aa
AA seq
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MKILHTSDWHIGHRLQLQDRTEEHKNFFHWLIQTINKEEVDVLIVSGDIFDIGYPSNQML
HLYYHFLLELKDSFCKRVIITGGNHDQASTLNAPKEILKALNIDIVGGMPNEMEKEIIRI
ETSNPERPLVIIATPFLRDREIRKSSPGESFETKMKATALGIATHYREAVDHILEDNTIS
PTIIAMGHLLVTGVSMSDSEREIHIGSLQGVPIDKFPPEIDYFALGHIHRPQKIQGNDHI
RYCGSPIPLSFSEHKDIKKVILVDIDDSDGNISTKELETPKLRYWKRTKGTLAEVQLTLQ
QHQSELEKKDWFEIQVIEPTYDPNIISTYESWLESERETDQYKIIKESLQFDQNENITSE
RDQYTKDLSEMTIKEVFTSLIVDKGIEDDELLLQTLNELLQDNPTLLD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttacacacatctgactggcatataggacacagactacaactacaggataga
actgaagagcacaaaaatttctttcattggttaatccagactattaataaagaagaggtg
gatgtattgatcgtatcaggagatatatttgatatcgggtatccatccaatcagatgtta
cacctttattatcattttctactagagttaaaagactctttttgtaaaagagttattatc
actggtggaaaccatgatcaagcaagtacacttaatgccccaaaagagattctaaaagcc
ttaaatattgatatcgtaggtgggatgcccaatgagatggagaaagagattattcgtata
gagacttcaaatcctgaaaggccactagtcattattgcgaccccttttcttcgagataga
gaaatccgaaaatcatcaccaggcgaatcctttgagaccaagatgaaagcgacagctctt
gggatagcaacacactacagagaagccgtagatcatatacttgaagacaacacaatctct
ccaactattattgcaatggggcatttattggtcacaggagtatccatgtctgatagtgaa
agagagattcatattggatcacttcaaggagtcccaatagataaatttcctccagaaatc
gactattttgcattagggcatatacatcgtccacaaaagatacagggaaatgatcatatc
cgttactgtggatctccgattccactatctttttcagagcataaggatataaaaaaagta
attcttgttgacatcgatgattcggacggtaatatatcgaccaaagagttagagacacca
aaacttcgttactggaaaagaacgaaaggaacactcgcagaggttcaattaacacttcaa
caacatcaatctgaattggagaagaaagattggtttgagatacaggttatagagccaacc
tatgaccccaatatcatctcaacctatgaaagttggctagagagtgaacgcgaaactgat
caatataaaattataaaagagagtttacagtttgatcaaaatgagaacattacgagtgaa
cgagatcaatacacaaaggatcttagtgaaatgacaattaaagaagtttttacctctctc
atagtcgacaagggaattgaagatgatgaacttttactacaaacattaaatgaactactt
caggataatccaaccttattagattaa
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