Halosquirtibacter xylanolyticus: K5X82_04845
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Entry
K5X82_04845 CDS
T10547
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
hxy Halosquirtibacter xylanolyticus
Pathway
hxy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K5X82_04845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hxy03021
]
K5X82_04845
Transcription machinery [BR:
hxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K5X82_04845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
KORA
Motif
Other DBs
NCBI-ProteinID:
QZT38232
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Position
1420565..1421425
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AA seq
286 aa
AA seq
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MRQLKITKSITNRESASLDKYLQEIGKEELITVEEEVELAQRIKKGDQAALEKLTRANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNQVGSLNKINKAFSKFEQEHERKPSPEELAETLDLPADKVSDTLRVSGRHV
SVDAPFVDGEDNSLLDVLVNDDSPNADRSLIGESLAKEIERSLATLTEREADIIRMFFGI
GCQEMTLEEIGERFGLTRERVRQIKEKAIRRLRHTSRSKLLKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaagatcacaaaatctatcactaaccgtgagagtgcttcactagacaag
tatttacaagaaattggtaaagaggagcttattaccgttgaagaagaagtagaattggct
caacggataaaaaaaggagaccaagcagcactagagaaactgactagagcgaacttgaga
ttcgttgtatctgttgccaagcagtaccaaaatcaaggacttacacttcctgaccttatt
aacgaaggaaacttaggtttgattaaagctgcagaaaaattcgacgaaacacgtggattt
aaatttatctcctatgcagtatggtggattcgccaatctatactacaagcattggctgag
cagtcacgtatcgttcgtctacctctaaatcaggtaggatctctaaataagatcaataaa
gcattctctaaatttgagcaggagcacgaaagaaagccttctcctgaagagctagcggaa
acgcttgaccttcctgcagacaaagtatcagatacccttagagtttctggtagacatgtt
tctgtagatgcaccttttgtcgacggggaagacaacagtttattagatgtactagtaaac
gatgattcaccaaatgcagatagaagtttgattggagaatctcttgcaaaagaaattgaa
cgttctcttgcgacccttactgaaagagaagcggatattattcgtatgttctttggtatt
ggatgtcaagaaatgactcttgaagagattggagaacgtttcgggcttacaagagagcgc
gtacgtcagatcaaagaaaaagcaatcagaagattgagacacacctctagaagtaaactt
cttaaaagttacttaggttaa
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