Halosquirtibacter xylanolyticus: K5X82_06790
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Entry
K5X82_06790 CDS
T10547
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hxy Halosquirtibacter xylanolyticus
Pathway
hxy03420
Nucleotide excision repair
hxy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5X82_06790
03430 Mismatch repair
K5X82_06790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxy03400
]
K5X82_06790
Enzymes [BR:
hxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5X82_06790
DNA repair and recombination proteins [BR:
hxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5X82_06790
MMR (mismatch excision repair)
Other MMR factors
K5X82_06790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_12
ResIII
Patatin
DEAD
Motif
Other DBs
NCBI-ProteinID:
QZT38594
LinkDB
All DBs
Position
1928904..1931228
Genome browser
AA seq
774 aa
AA seq
DB search
MYDYLETLNTPQRNAVENIDGPTLVIAGAGSGKTRVLTYRIAHLVNKDISEKNILALTFT
NKAAREMKERISDAVGEERAKNLWMGTFHSIFSKILRIEAEAIGYPSTFTIYDTQDAKSV
IKSIIKNKKLDDKIYRPSVVQSRISTAKNNLVTPKNYINNKDIKEADKIKQMPQLGAIYL
EYTRRCKKAGAMDFDDLLLETNILFRDHPDILEKYQKRFKYILVDEYQDTNFSQYLIIKK
LAALNKNLCVVGDDAQSIYSFRGAKIENILNFRNDYPEYKTFKLEQNYRSTQTIVEAANS
VIKKNSNQIPKKTYSENEIGERIQLFYTLTDNEEGIEVARKITQVKRDKGYNYEDFSILY
RTNAQSRIFEECLRKRNIPYKIYGGLSFYQRKEIKDVLAYFKLIINTQDDESLKRIINFP
TRGIGATTMSKLENAAAFHDLSIFEVASDAHHCQLAGLNAGAFKKVQAFIEMINEMSSKS
NMMNAFEMAEMVCEKTKILEEYDFNHNPENKGKTENIQELINGIKDFTDNSMEEGKSFLI
LDYISEVALLTDQDTQNGEDTDRVTLMTVHSSKGLEFKNVFIVGMEEKLFPSIKETSLNV
QELEEERRLFYVAITRAETNLWLSFVKQRSKWGKIEFCTPSRFLSEIDTQYVKMPLESES
EIFIKRKETQRKRLEKHQYGHLETIESTVDNIKGVRLSGKIKRMEDLAKMNDKVVIGADP
NSLTPDTRVKHQRFGIGIIQAIEGEQANKKAVILFEEHGAKTLLLRFAKLQVLD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgattatcttgaaaccttgaatactccgcagagaaatgcggttgaaaatattgat
ggaccaactttggttattgctggtgctggatcaggaaaaacaagggtattgacctatcga
atagcacaccttgtcaataaagatattagtgaaaaaaacattttggcgttgacttttacc
aataaggcagcaagagagatgaaagagcggatatcagatgcggttggggaagagagggca
aagaacttgtggatgggaacttttcattcaattttctccaagatactccgaatagaagcg
gaagccataggatatccatcaaccttcactatttatgatacacaagatgcgaagagtgtt
attaaaagcatcatcaagaacaagaaattagacgataaaatttatcgaccttcggtggtt
caaagtagaattagtactgcaaaaaacaacttagttactcccaagaattacatcaataat
aaagatataaaagaggcggataagattaaacaaatgccacagcttggagccatatacttg
gagtatacaagacgctgcaagaaggctggagcaatggactttgatgatcttcttttggaa
acaaatatactgtttagagaccatcctgatattttagaaaaataccaaaaaagattcaaa
tacattcttgtagacgagtatcaagataccaacttctcacaataccttatcattaaaaaa
cttgcggcattaaacaagaatctatgtgtggtaggtgatgatgcacagtcgatctattcc
ttccgaggagcaaagattgagaacatattgaacttcagaaatgattaccctgagtataaa
acatttaaactagagcagaactacaggtcgacacagaccatcgttgaagctgcaaatagt
gttattaagaagaattcaaatcagattccaaagaagacctactctgagaatgagattggt
gagcgtattcaactcttttatacactaacggataatgaagaaggtatagaagttgcaagg
aaaattactcaggttaaaagagataaaggttataattatgaagatttctctatcttatat
cgaaccaatgctcagtcgcgaatctttgaagagtgtctaagaaagagaaatattccatat
aaaatctatggtggtttgtctttctatcaacgaaaagagatcaaagatgtattagcctat
tttaaactgatcatcaacacacaagacgatgaatcgttaaagcgaatcatcaactttccc
acaaggggtatcggtgcaaccaccatgagtaagttagagaatgcagcagcattccatgac
ttaagtatctttgaagtagcgtccgatgcacatcactgccagcttgcaggacttaacgca
ggggcgtttaagaaagtccaagcttttattgagatgatcaatgagatgtcatcgaaatct
aatatgatgaatgctttcgagatggcagaaatggtttgtgagaagaccaaaattcttgaa
gagtacgattttaatcacaaccctgaaaacaaaggaaagactgaaaatattcaagaactg
attaatggaattaaagattttaccgataattcgatggaagaaggaaaatctttcttaatt
ttagactatatatcggaagttgcactgttaacagatcaagacacacaaaatggtgaagat
actgatcgtgtgacattaatgacggtacactcatctaaaggactcgagtttaagaatgtt
tttatagttgggatggaagagaaactattcccatcgattaaggaaacatcattaaacgtt
caagaattagaggaagagagaagactcttctatgttgcaataacaagggcagaaacgaac
ttgtggctctcttttgtaaaacaaagatctaaatggggcaaaattgagttttgtactcca
agtcgttttctatcggagattgacactcaatatgtaaagatgccactagagtcagagagt
gagatctttattaagagaaaagagacacaacgaaaacgtctagaaaaacaccaatacgga
cacctagaaacgatagagtcaaccgtagacaatataaaaggggttcgattatcagggaag
atcaaacgcatggaagatcttgctaaaatgaatgataaagtagtaattggagcagatccg
aacagtttaacccccgatactagagtaaaacatcaacgatttggtattggaattatacaa
gcaatagaaggcgaacaagcaaacaaaaaagcggtaattttgtttgaagaacatggagcg
aagacgctgctactacgttttgccaaactacaagttctagattaa
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