Halosquirtibacter xylanolyticus: K5X82_08275
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Entry
K5X82_08275 CDS
T10547
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hxy Halosquirtibacter xylanolyticus
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hxy03032
]
K5X82_08275
03036 Chromosome and associated proteins [BR:
hxy03036
]
K5X82_08275
03400 DNA repair and recombination proteins [BR:
hxy03400
]
K5X82_08275
DNA replication proteins [BR:
hxy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K5X82_08275
Chromosome and associated proteins [BR:
hxy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K5X82_08275
DNA repair and recombination proteins [BR:
hxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K5X82_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Ribosomal_L12
DUF2635
Motif
Other DBs
NCBI-ProteinID:
QZT38880
LinkDB
All DBs
Position
2331333..2331605
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIKKVSEETGLTIKDTKKTVEAFLNATMETLKEEDRLIIAGFGSFYTIDREAREV
RNPATGKPVKVEAKRIVRFKAGQDFGNKIN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaattaattaaaaaggtttctgaagaaacaggattgacaattaaggac
acaaagaaaacagtggaagcttttcttaatgcaaccatggaaacgttgaaggaagaggac
agactaattattgctggattcggttcgttctacactatcgacagagaagctcgtgaagta
agaaaccctgcaactggaaaaccagttaaggttgaagctaaaagaattgttcgtttcaaa
gctggacaagacttcggaaacaagattaactaa
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