Halosquirtibacter xylanolyticus: K5X82_12050
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Entry
K5X82_12050 CDS
T10547
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hxy Halosquirtibacter xylanolyticus
Pathway
hxy03030
DNA replication
hxy03410
Base excision repair
hxy03420
Nucleotide excision repair
hxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5X82_12050 (polA)
03410 Base excision repair
K5X82_12050 (polA)
03420 Nucleotide excision repair
K5X82_12050 (polA)
03440 Homologous recombination
K5X82_12050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hxy03032
]
K5X82_12050 (polA)
03400 DNA repair and recombination proteins [BR:
hxy03400
]
K5X82_12050 (polA)
Enzymes [BR:
hxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5X82_12050 (polA)
DNA replication proteins [BR:
hxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K5X82_12050 (polA)
DNA repair and recombination proteins [BR:
hxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K5X82_12050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5X82_12050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
DUF5066
Motif
Other DBs
NCBI-ProteinID:
QZT36026
LinkDB
All DBs
Position
3294889..3297705
Genome browser
AA seq
938 aa
AA seq
DB search
MADEKRIFLLDAYALIYRSYFAFIKNPRYNSKGLNTSAMLGFTNTLEDLLRKENPDYIAV
VFDVHAPTFRHKMYPEYKANREAMPEDLRASIPYIRDIIKAYNIPIVESEGYEADDVIGT
LSVKAKSEDFTTYMMTPDKDYAQLVNDSVFMYKPKRMGNDTEIWGIAEVCDKFGVDDPIK
VIDILGLMGDSSDNIPGCPGVGPKSATKLINQFGSINGVYENISKLKGAQKKKLEENEEQ
VKLSRVLAEIMLDAPVDVTFDEMKRQDPNEGELNSIFSELEFRALIQKYNSSTVSKTPQE
GLFQPQQGDLFGRVSQPSLFDNLAQEEVEVPRETIAAFENSELKYYLVDTPALRADLRAD
LCIQSSFCFDTETTGLDPISAEIVGISFSFKEGEAYYVPISSDRSTAKEILQEFASIFKD
ESIEKVGQNIKYDMLILLQYGLVIKGRLFDTMIAHYLLEPELRHNLDYLCEQYLNYRKIP
TESLIGKKGKNQKSMRDLPVDEVCRYACEDADFTFRLKSLFLPKLKESNLEELFLNVEMP
LVHVLAIIENNGVCFDTSSMSDTQIRLTRELIQLEKEIISLAGEEFNVSSPKQLGIILFE
KLNLDAKAKKTKTNQYSTSEEVLVKLKSKHQIVEKVLEFRSMKKLLSTYVEALPKLINKR
TGRIHTSFNQTVTATGRLSSNNPNLQNIPIRDAQGKEIRKAFVVPDEEHLFVSADYSQVE
LRIMAHLSQDEGMLEAFALDIDIHTATAAKIYKVSTSEVTSDMRRKAKTANFGIIYGISA
FGLSQRLNISRSEAKDLIDGYFESFPKVKEFMNMQIEVARENQYVETILKRRRYLRDINS
ANGMVRGMAERNAINAPIQGSAADIIKIAMNRIQARIEELKLKSKMILQVHDELNFEVCK
TEFDLVCSIIKSEMENAVDLAVPLKVDIGFGVNWLEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgagaaaagaatatttctactcgatgcttatgcattgatttatcgttcatac
tttgcttttatcaagaaccctaggtataattcgaaagggcttaatacttctgcaatgtta
ggttttactaacactttagaggatctattgagaaaagaaaaccctgattatattgctgtc
gtttttgatgtccatgctcctacttttagacataaaatgtatccagagtataaagcgaat
agagaagccatgcctgaggatctacgagcttctattccttatatccgagatattattaag
gcttacaatatcccaattgttgaatctgaaggttatgaagctgatgatgttattggaaca
ctatctgttaaggcaaaatcagaggattttacaacttatatgatgactccagataaggat
tatgcgcagcttgttaatgactctgtttttatgtataaacctaaacgtatggggaatgat
actgaaatttgggggattgccgaagtttgtgataagtttggtgtagatgatcccattaag
gtcattgatatacttgggttgatgggggatagttcggataacatacctggatgccctggt
gttggaccgaagtctgccaccaaattgattaatcaatttggctcaattaatggtgtatac
gagaatatatcaaaacttaaaggtgctcaaaaaaagaaactggaggaaaatgaagagcaa
gttaaactttcgagggttcttgctgaaattatgctggatgctcctgttgatgtcactttt
gatgagatgaagaggcaagatcccaatgaaggtgaattaaactcaatttttagtgaatta
gagtttcgtgcattaattcagaaatataatagtagtactgtttctaaaactccacaagaa
ggtctgtttcaaccgcaacaaggggatttgtttggaagagtttcacaaccatctctattt
gataatttagcacaagaagaggtagaggttccacgtgaaactattgctgcatttgaaaat
agcgaattaaaatattatctagttgatacgcctgccttacgagccgatctccgtgcagat
ttgtgtatacagtcatctttctgttttgatactgagacgacaggtttagatccaatatct
gctgagattgttggaatttcattttcgtttaaagagggtgaagcttactatgtcccgata
tcttccgatagatcaacagccaaagagatcttgcaagaatttgcttctatatttaaggac
gagtctattgaaaaggtagggcagaacatcaaatatgatatgcttattttactacaatat
ggattagtaattaaaggtaggttatttgatacaatgattgcccactatctattagaacct
gagttaagacacaacttagattatttgtgtgagcaatatttgaactatagaaaaattcct
acggagagcctgattggtaaaaaggggaaaaatcagaaaagtatgcgtgaccttcctgta
gatgaagtttgtcgttatgcttgtgaagatgctgattttacttttaggttgaaaagtctt
tttttacctaaattaaaagagtcgaacctagaagagttgtttctgaatgtggaaatgcct
cttgttcatgttttagctatcattgaaaataatggtgtatgttttgacactagttcgatg
agtgatacacaaattagattaacaagagagctaattcaattagagaaagagatcatctct
ttggctggtgaagaatttaatgtctcttccccaaaacagttaggtattattttatttgag
aaacttaatctagatgctaaagcgaagaaaacaaaaacaaatcagtactccacttcggaa
gaggtgttggttaagttaaaatcaaagcatcaaattgttgaaaaagtgttggaatttcga
tctatgaagaaactcctttctacttatgtagaagcacttcctaaattaataaataagagg
actggaaggattcatacttcctttaatcaaactgttactgcaacaggaagactgagttct
aacaacccgaatttacagaacattcctattcgtgatgcccaaggaaaggagattagaaag
gcttttgttgttcctgatgaggaacatttatttgtctctgccgattattctcaagtcgaa
ttacgtataatggctcatttaagtcaggatgaaggtatgttggaagcttttgctttagat
attgatattcatacagctactgctgctaagatatataaagtttcgacttctgaggtgact
tctgacatgagacgaaaagcaaaaactgctaactttggaattatttatggaatttctgct
tttggtttatcacaaagactcaatatttcaagatctgaagcgaaagatcttatagatggg
tattttgaatcatttccaaaagtgaaagagtttatgaatatgcagatagaagtggcaaga
gagaatcaatacgtggagacaatattgaaacgtagacgttatctacgtgatattaattct
gcaaatggcatggtgagaggtatggctgaaagaaatgctataaatgcgccaattcaagga
tctgctgctgatattattaaaattgccatgaatcgaattcaagcccgcatagaagagctt
aaacttaaatcaaagatgattcttcaagtacatgatgaattaaattttgaagtttgtaaa
acagaattcgatttagtttgttctattattaaatcggaaatggaaaatgcggtagattta
gctgtccccttaaaagtagatattggttttggcgtaaactggcttgaggcacattga
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