Halosquirtibacter xylanolyticus: K5X82_12460
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Entry
K5X82_12460 CDS
T10547
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
hxy Halosquirtibacter xylanolyticus
Pathway
hxy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K5X82_12460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hxy03000
]
K5X82_12460
Transcription factors [BR:
hxy03000
]
Prokaryotic type
Helix-turn-helix
Other families
K5X82_12460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA_2
AAA
NarQ_GAF-like
AAA_3
nSTAND3
HTH_50
bpMoxR
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
QZT36093
LinkDB
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Position
complement(3394722..3396296)
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AA seq
524 aa
AA seq
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MERDNTICNYSGKPCNINDEMNLLFDISQTLIRSQDVSSTLTPILKMVCDHLNSDSSFLA
ILNRQRSQIVVGESYGLSPAQESKGKFKIGEGIIGRVVELARPVVIENLGESKFFSNKMN
QLTNQGANYTFICVPIFQEEQVVGTLSSTMKYRPQNSYDSEKRLLAIIGTMLVQAVKTKR
TQMDEIEKLRAENLGLKQTSSKARNFSSIVGNSSKMKDVFNQVSLVAKTMSTVLIRGESG
IGKEMIADAIHFSSDRAEKPFIKVNCSAIPEALIESELFGHERGAFTGADSRRKGRFELA
DGGTIFLDEIGDLPMSTQVKLLRVLQERTFERLGGTETLKTDVRFVCATNRHLEEMMTNG
EFREDLFYRINVFPLFVPALRERKNDIPLLVDHFIQKYNNQNNASINRITQRAMDRLMMY
SWPGNVRELENTIERACIMAHDNVIHSYSLPTTLQIEENIGEHKKDGLEETISSIEKQVI
QKALTEHKGSIKRTSEQLKISERKLGLRLMKYKIKASDYKNKNK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagataacaccatttgcaactattcaggaaaaccatgtaatattaatgatgaa
atgaatcttctcttcgatattagtcaaacactaatacgaagtcaggatgtatcatcaaca
cttactcctatactgaaaatggtgtgtgaccatttaaatagtgatagttcatttttagcg
attcttaatcgtcaaagatcccaaatagttgtcggcgagtcctatggtcttagtcctgca
caagagtctaagggtaaatttaaaatcggagaaggaattattggtagggttgtcgaactt
gcccgtcctgtagtcattgaaaatctaggtgaatcaaagttcttctctaataagatgaac
caattaaccaatcagggagccaattatacattcatatgtgtccctatttttcaggaagag
caagtcgttggcacccttagttcgaccatgaaataccgtccacaaaatagctatgatagc
gaaaaacgtcttcttgcaatcattggaacgatgctagtacaagcggtaaaaactaaacgt
acacaaatggacgagattgagaagcttcgtgcagagaatttaggtctaaagcaaacatcc
agcaaagcgcgaaatttctcgagtattgttggaaacagctctaagatgaaagatgtgttt
aaccaagtgtccctggttgcaaaaactatgtccactgttcttatacgtggagaaagcggt
attggtaaagagatgattgccgatgcaatccacttttctagcgatcgtgcagagaaacca
tttattaaggtaaactgttctgctattcctgaagcactgatcgaaagtgaactttttgga
catgaaagaggagcttttactggagcagacagtcgtcgtaaaggccgttttgaactagcc
gatggaggtacaatattcttagatgaaataggagatctaccaatgtcaacccaagtaaaa
ctgctaagagtgctacaagaacgaacattcgaaagacttggtggaaccgaaacacttaaa
acagatgtccgcttcgtttgtgccaccaacagacacctagaagagatgatgaccaatggt
gaatttcgagaagatttattctaccgtattaacgtattccctctttttgttcctgcatta
agagagcgaaagaatgacattcctcttcttgtagaccattttattcagaagtataacaat
caaaacaatgcttccattaatagaataacacagagggcaatggatcgtttgatgatgtat
tcttggccaggtaacgtacgagaactcgaaaacacaattgaaagagcgtgtatcatggca
catgataacgtcattcacagttattctctcccaactactcttcagattgaggaaaatata
ggagaacacaagaaagatggcttagaagagactatatcatctattgagaagcaagttatt
caaaaagcacttacggagcataaaggaagtattaaaagaacatctgaacaacttaaaatc
tcagaacgaaaacttggactcaggcttatgaagtataaaattaaagcgtctgattacaaa
aacaagaacaaataa
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