Halosquirtibacter xylanolyticus: K5X82_13130
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Entry
K5X82_13130 CDS
T10547
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hxy Halosquirtibacter xylanolyticus
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hxy03016
]
K5X82_13130 (truB)
Enzymes [BR:
hxy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K5X82_13130 (truB)
Transfer RNA biogenesis [BR:
hxy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5X82_13130 (truB)
Prokaryotic type
K5X82_13130 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QZT36211
LinkDB
All DBs
Position
complement(3570644..3571360)
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AA seq
238 aa
AA seq
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MDSFDFKDGEVLAFDKPLEWTSFNVVGKVRHKICRYLGVKKLKVGHAGTLDPMATGLMVL
CTGKATKKIEQIQGTEKEYIAELKLGATTPSFDVESEEDAEYPYQHINREIIDKVLPQFI
GEIDQVPPIFSAVKVNGRRAYDLARKGEEIELRSKKITIKEIEVLEFKEQHLSLRVVCGK
GTYIRSLARDFGEALESGAYLTGLRRTRVGDFKVDQAYTIEDFCSFLDEAIQAKKEEK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttggattcatttgattttaaagatggtgaagtgttggcttttgataagccactagagtgg
acatcatttaatgtggtagggaaagtcagacataagatttgtcgctacttaggtgtgaag
aagttgaaagtggggcatgcaggaacgttagatcctatggcaacaggattaatggttctt
tgcacaggtaaagccactaagaagatagagcagattcaaggtacagagaaagagtatatt
gcagagctaaagctaggagcaactacgccatctttcgatgtggagtccgaagaagatgca
gaatatccttatcaacatatcaatagagaaattattgacaaggtgttaccacaatttatc
ggagagatagatcaggttccacccatcttttctgctgtaaaagttaatggtcgtcgtgct
tatgacttggcccgaaaaggagaagagatcgagttgagatcgaaaaaaataacgattaaa
gagatcgaagtcctagagtttaaagaacaacatctctctttgcgtgttgtttgtggtaaa
ggaacatatattcgttctcttgcaagagatttcggagaagcccttgaaagtggcgcctac
ctcacaggattacgtagaacacgtgttggggattttaaggtagaccaagcttatactatc
gaggatttctgtagtttcttagacgaagcaatacaagcaaagaaagaagagaaataa
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