Halosquirtibacter xylanolyticus: K5X82_13675
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Entry
K5X82_13675 CDS
T10547
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hxy Halosquirtibacter xylanolyticus
Pathway
hxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5X82_13675 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hxy03019
]
K5X82_13675 (recQ)
03400 DNA repair and recombination proteins [BR:
hxy03400
]
K5X82_13675 (recQ)
Enzymes [BR:
hxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5X82_13675 (recQ)
Messenger RNA biogenesis [BR:
hxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K5X82_13675 (recQ)
DNA repair and recombination proteins [BR:
hxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K5X82_13675 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
HTH_40
ResIII
FPV060
Motif
Other DBs
NCBI-ProteinID:
QZT36310
LinkDB
All DBs
Position
complement(3708588..3710768)
Genome browser
AA seq
726 aa
AA seq
DB search
MDRSISLTDELKKYFGFDRFKGSQEEVIHSILDQNDTFVLMPTGGGKSLCYQLPALISEG
TAIVISPLIALMKNQVDAIRSISTNNGIAHFLNSSLSKSATNQVKEDVRNGITKLLYVAP
ESLTKQENIDFLNEITISFYAIDEAHCISEWGHDFRPEYRRIRPIVHEIGSAPIIALTAT
ATPKVQHDIQKNLGMSNARVFKSSFNRENLFYEIRSKNKAPEQIIKFIKQREGKSGIIYC
LSRKKVEELAATLQVNGIRALAYHAGMDSTTRSGNQDKFLMEEVDVIVATIAFGMGIDKP
DVRFVIHYDVPKSLEGYYQETGRAGRDGGEGHCLTFYSYKDIQKLEKFMQGKPVAEQEIG
QQLLLDTVAFAESAICRRKVLLHYFGESYTVNNCGNCDNCKMPKEQIEGREMILMALNAV
KEVKQQYKSEHMVDILTGVKNAAVKSFKHESLDHYGKGEDQDPRLWKAVYRQCIIAGYLH
KDIENYGVLKMTPEGEGYIENPHSFMVVKNHDYEAVVEEGLSSPGGNSTGDPELFNMLKD
LRKKEAKKRDLPPYILFQESSLSDMSIQYPTKIDELQHIVGVGQGKAKKYGKPFIELIQK
YVTENGIIRAQDMVVKSVANKSKNKVFIIQAIDRKMPLDDIANSKGLELNDLISELEAIV
NSGTKINIDYYLEQEIDEDAIDDIFDFFHDDSETGELSEAYEELGDDYAEEDIRLVRLKF
LSEVGN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacagaagcatttcattaacggacgaattaaaaaaatactttggcttcgatagattc
aaaggaagtcaagaagaggtcatccacagtatcctcgatcagaacgatacttttgtgttg
atgcctacgggagggggaaaatctctttgctaccagttacctgctctgatatcagagggt
actgctattgttatatcgccgcttatcgctttgatgaaaaatcaagtggatgctattagg
tcgataagtaccaataacggcattgcccattttctgaactcctctctttcaaaatcggcc
accaatcaagtaaaagaagacgtacgcaatggtattacgaagttactatatgtagctcct
gagtctttgaccaaacaagagaatatcgattttttgaacgaaattacgatctcgttctat
gcaatcgatgaagcccactgtatttcagagtggggtcatgatttcagacccgaatatcgt
cgtatacgtcctattgtccacgagattggttcagcaccgatcattgccctaacagctacg
gcgactccaaaagttcaacatgacatacaaaagaacttaggcatgagcaatgctagagtt
tttaagtcctcttttaatcgtgaaaatctattctatgagattcgttctaagaacaaagca
ccggaacagatcatcaagtttattaaacagcgagaaggcaagtctggtattatttactgc
ttaagtcgcaagaaggtagaggagcttgcagcaaccttacaagttaacggtatacgtgca
ttggcctaccatgcaggtatggattcgaccacgcgttcaggaaaccaggataagtttcta
atggaagaggtcgatgtgattgttgcaaccattgcttttggaatgggcatcgataaacca
gatgtaaggtttgtgatacactatgatgtacctaaatctttagaaggctactatcaggag
acaggtagagctggtcgagatggcggtgaaggtcattgtttgacattctatagctacaaa
gatattcagaagcttgaaaagtttatgcaaggaaagccagttgcagaacaagagattgga
caacaattgcttttggataccgtggcttttgctgaatctgcaatatgtagacgcaaggtg
ctgttgcactatttcggtgaatcctataccgtaaataactgtggcaactgtgacaactgt
aagatgcctaaagagcagatagagggtcgtgagatgatcttgatggctttaaatgctgta
aaagaggtaaagcaacagtataagtcagagcatatggtagatattcttacaggagtaaaa
aatgctgctgttaaatcctttaaacacgaaagtcttgatcattatggcaagggggaagat
caagaccctagactgtggaaggctgtctatcgtcaatgtattattgcaggatatctacat
aaagatatcgaaaactacggagtattaaagatgactccagaaggagaaggctatatagaa
aatccacactcttttatggtggtaaaaaaccacgattatgaagctgtagttgaagaggga
ctgtcttcaccaggaggcaactcaacgggtgatcctgagctcttcaatatgttgaaagat
cttcgtaaaaaagaggctaagaagagggatcttccaccatatattcttttccaagagtca
tcattatcggatatgtcgattcaatatccaaccaagatagatgaacttcagcatattgta
ggtgtaggacaaggaaaggctaaaaaatatggaaagccattcatcgaactgatccagaaa
tatgttacggagaacggtattatccgtgcacaagacatggttgtaaagagcgtggccaac
aagtcaaagaataaagtatttatcattcaagcgatcgatcgtaagatgccacttgatgat
attgcaaattcaaaagggttagagttaaatgacttgatatctgagttggaggcaattgtc
aattcaggaactaaaatcaatatcgactattatttagagcaagagattgatgaggatgcg
attgacgacatctttgatttcttccatgatgattcagaaactggagagctctccgaagct
tatgaagagttaggtgatgactatgcagaagaagacattcgattggttcgtttgaagttc
ctttctgaagttggaaactaa
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