Halosquirtibacter xylanolyticus: K5X82_15960
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Entry
K5X82_15960 CDS
T10547
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hxy Halosquirtibacter xylanolyticus
Pathway
hxy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K5X82_15960 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hxy03400
]
K5X82_15960 (xseA)
Enzymes [BR:
hxy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K5X82_15960 (xseA)
DNA repair and recombination proteins [BR:
hxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K5X82_15960 (xseA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Glyco_transf_43
Motif
Other DBs
NCBI-ProteinID:
QZT36722
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Position
4351319..4352758
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AA seq
479 aa
AA seq
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MKEGVRLSQVLGFVENVISTSFKSPFWLNCELSEVKVNSRGHCFVQLVEKDNDSDKIVAK
SSGIIWATSYTSLERKFSEATGQSIGPGVKVLLRVQVDFKALHGLNFQIQDIDPSYTLGE
IERRRRETIARLKKEGLLERNSTMEKPWCFQNIAVISSEHAAGYQDFVDQVVRNRYGFSC
KITLFQALLQGENAEASILEALDNISNHTEEFDGLVIIRGGGSQIDLSVFDSYSISKIIA
LWPVPVITGIGHTRDISVVDQVVAIPMKTPTAVADYIIERMLIVYEKLNLAAHRFSVRIK
KVLEKEHQLQQRLSYNLRHTLLEERGRRRDKQYKLFQSFQLKTTDILRRNDRQLDHLNIG
IRSAAKHNIINKDHAISRFRHQLSTFCKIDLLKKEEEWKTFYKTLNSLVDNSINSNKTKL
GYWEQIVRSYDPHKILKRGYAFVKKDGVLVSSTTELCPEDRIETVFHDFVLYSKVVEKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagggtgttcgattatctcaagttcttggatttgtagagaatgtgatctccact
tcttttaaatctccgttttggctcaattgtgagttgtctgaagtaaaggtcaactcacga
ggccattgttttgtccaattggtagagaaagataacgactcagataagattgtggcgaaa
tcttctggtatcatttgggccacttcctacacatcactagaacgtaaatttagcgaagca
acaggtcaatctattggtcctggtgtcaaagtattactacgtgttcaagttgattttaaa
gcgctgcatggcttgaatttccagattcaagatatcgatccaagttatactcttggagag
attgagcgaagaagaagagagaccatcgctagattaaaaaaagagggactattagagcgg
aatagtacgatggagaaaccttggtgttttcagaatattgctgtgatctcatcagagcat
gctgctggatatcaggatttcgtggatcaggtggttcgaaatcgttatggtttctcatgt
aagataactctttttcaggctttacttcaaggcgagaatgcggaggcaagcattcttgag
gcattggataatatatctaatcatacagaagaatttgatggattagtgatcattcgaggt
ggaggatcgcagattgatctgtcggtctttgattcatattctatttctaagattattgca
ttatggcccgttcctgtgattactgggatagggcatactagggatatctctgtggtagat
caagtggtcgcaataccgatgaagactcctactgctgttgccgattacattatcgaacgg
atgcttattgtgtatgaaaagctaaatcttgctgcccatagattctctgttcgtatcaag
aaagtgttagagaaagagcatcagcttcaacagcgattatcttataatttgcgccataca
cttttagaagagagagggcgtcgaagagataaacagtataaattatttcaatcatttcag
cttaaaacgaccgatattctaagacgtaatgaccgccaattagatcatctaaatattgga
ataaggagtgccgcaaagcataatataatcaataaagatcatgcgatttctcggtttcgt
catcaattatctacattttgtaaaatagatttgttgaaaaaagaggaggagtggaaaacg
ttttataagactttaaattcactggttgataatagcataaatagtaataaaacaaaatta
ggctattgggagcagattgttagatcttatgatcctcataaaatactcaaaagaggttac
gcctttgtgaaaaaagatggggtattggtatcttctactactgagttgtgtcccgaggat
aggatcgagactgttttccatgattttgttttatatagtaaggttgttgaaaagaaataa
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