Halosquirtibacter xylanolyticus: K5X82_16545
Help
Entry
K5X82_16545 CDS
T10547
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
hxy Halosquirtibacter xylanolyticus
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hxy03032
]
K5X82_16545
03036 Chromosome and associated proteins [BR:
hxy03036
]
K5X82_16545
03400 DNA repair and recombination proteins [BR:
hxy03400
]
K5X82_16545
DNA replication proteins [BR:
hxy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K5X82_16545
Chromosome and associated proteins [BR:
hxy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K5X82_16545
DNA repair and recombination proteins [BR:
hxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K5X82_16545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_bac_2
DUF134
PqqD
TrmB
Motif
Other DBs
NCBI-ProteinID:
QZT36825
LinkDB
All DBs
Position
4504160..4504444
Genome browser
AA seq
94 aa
AA seq
DB search
MTKADIVNEVSKNTGIERVTVQKAVEAFMDTVSDSLVEGKNVYLRGFGSFIVKKRAEKTA
RNISKNTTIIIPEHFIPAFKPAKSFVSKVKDNVK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagatattgtaaacgaagtttcgaagaatactggtatcgagagagttaca
gttcagaaggcagttgaggctttcatggatactgtttcagattctttagtagagggaaaa
aatgtgtatcttcgtggattcgggagttttatcgtaaaaaaacgcgctgagaaaaccgct
cgtaacatttcaaagaatacaactattatcattccagagcactttatcccagcctttaag
ccagcaaagtcatttgtgagcaaggttaaagataacgttaagtaa
DBGET
integrated database retrieval system
