Halosquirtibacter xylanolyticus: K5X82_18255
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Entry
K5X82_18255 CDS
T10547
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hxy Halosquirtibacter xylanolyticus
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hxy03009
]
K5X82_18255 (rimO)
Enzymes [BR:
hxy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K5X82_18255 (rimO)
Ribosome biogenesis [BR:
hxy03009
]
Prokaryotic type
ribosomal protein modification factors
K5X82_18255 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
DUF5666
Motif
Other DBs
NCBI-ProteinID:
QZT37153
LinkDB
All DBs
Position
complement(4968219..4969514)
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AA seq
431 aa
AA seq
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MNKKVNIVTLGCSKNLIDSELFMGQLEANGYEVVTDSNETDAEIVAINTCGFILDAKEES
INTVLDFVEAKKRGEISKIFVFGCLTERYKDELMAEIPEVDGFYGKFQVKKMVEDLEGEY
KMSLKNQRYVTTPSHYAFLKISEGCNRTCSYCAIPYITGKHKSRPIEDIVIEATLLAKKG
VKELLVIAQDLSFYGLDLYKEQRLAELVRQLSKIEGIEWIKLHYAYPSNFPYDLLPVMQQ
EPKVSLYLDIALQHISDHMLKLMRRNINKQETLDLLARIRKEVPGIHLRTTLLVGHPGET
EEDFEELCEFVETARFERLGVFAYSHEDNTYAGDNYEDIIPSDVKQERVDRIMELQQNIS
LLHNETKVGMTMKVVVDRIEGDLFIGRTEFDSPDVDGEVFISSEEELAIGQFVEVKITEA
SDYDLYAEVIK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaggttaacattgttacattaggttgttcaaaaaatctaattgattcagag
ttgtttatgggacagcttgaagcgaatggttatgaggtagtgacggattcgaatgaaaca
gatgcggagattgtagctatcaacacttgtggtttcatcttagatgccaaagaggagtcc
atcaacacggttttagactttgtagaagcgaagaaacgtggagagatatctaaaatcttt
gtctttggttgtcttacggagagatacaaagatgaattgatggcagaaatccctgaagta
gatgggttctatggtaagttccaagtaaagaagatggtcgaagatttagaaggcgaatac
aagatgagcttgaagaatcaacgctacgttaccaccccttctcactatgcattcctaaag
atctcagaaggatgcaataggacatgttcttattgtgccattccttatataacaggaaaa
cataaatcaagaccaatagaggatatcgtaattgaagctacacttcttgcaaaaaaagga
gttaaagagttactcgtaatagcacaagatctatctttttacggtttagatctatacaaa
gagcaacgcttagcggaacttgtacgtcagctttcaaagattgaaggcatcgaatggata
aaacttcattatgcatatccatcgaacttcccttatgatctgctacctgtaatgcaacaa
gaacctaaggtatcactgtaccttgacatcgcattgcaacacatttcagaccatatgctg
aaattgatgcgtcgtaatatcaacaaacaagagacattagacttactcgctcgtattcgc
aaagaggttcctggcattcaccttcgtaccacactacttgtcggtcaccctggtgaaaca
gaagaggactttgaagagctatgtgaattcgttgagacagcacgtttcgaaagacttggt
gttttcgcttattctcatgaagacaacacatatgctggagataactacgaagacattatt
cctagtgatgtaaagcaagaacgtgttgacagaattatggagctacaacaaaacatctca
ctactacataacgaaacaaaagttgggatgacaatgaaagttgtagtagaccgtattgaa
ggagatctatttataggaagaacagaatttgactctcctgatgtcgatggtgaagtgttt
atctcaagcgaggaagagcttgcaattggacaatttgtagaggtgaaaattacggaagca
tcagactatgatctatatgctgaggtgatcaaataa
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