KEGG   Hydrogenobaculum sp. Y04AAS1: HY04AAS1_0296
Entry
HY04AAS1_0296     CDS       T00745                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hya  Hydrogenobaculum sp. Y04AAS1
Pathway
hya02024  Quorum sensing
hya03060  Protein export
hya03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hya00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HY04AAS1_0296
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HY04AAS1_0296
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HY04AAS1_0296
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hya02044]
    HY04AAS1_0296
Enzymes [BR:hya01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HY04AAS1_0296
Secretion system [BR:hya02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HY04AAS1_0296
  Eukaryotic Sec-SRP protein
   HY04AAS1_0296
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_30 CbiA AAA_7 MobB AAA_19 YqeC ATP_bind_1 CLP1_P AAA_33 nSTAND3 cobW AAA MMR_HSR1 T2SSE AAA_17 Thymidylate_kin AAA_14 AAA_5 Fer4_NifH AAA_16 TEX12 Viral_helicase1 AAA_18 NTPase_1 AAA_31 AAA_28 ArsA_ATPase
Other DBs
NCBI-ProteinID: ACG56986
LinkDB
Position
255985..257292
AA seq 435 aa
MLELLTEKISGSLEKLKGAKKLNEKLVNDTLRDIRAALLEADVDYDVAKDFIKRLRERIF
SEEIKTHLSPTDMIIMSVYDELVKTLGGNASPLEEGVVMFVGLQGTGKTTTIGKLANLMK
KNGRSVMTVSTDVRRPAAMLQLKRVSELAGVEYLEFSPDKNPVDIAKEAFEAFKSKKYDY
LFLDTAGRLHIDNELMEELRAIKEAVKPSEVIYVADSMQGQEALSVAKTFNEVVGLTGAI
LTKMDGDTRGGVALSIKDAIGIPIKYIGVGEKLEDIDQFYPDRIAQRILGLGDLQSLIEK
AEQVISEDEAQAITYKMMRGEFDLNDLKKNISFMMNMGPLDKVLSMLPGVGSQLKNIKVD
QKIFKRIIAMVDSMTPEERANPNVINLSRKQRIAKGSGTTVSDVNKLLKQYQDMKKMIRK
LKNQKSPFGGLGLPF
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgctggaacttttaacggaaaagattagtggaagcttagagaagctaaaaggcgctaaa
aagttaaatgaaaagttagttaacgatactcttagagatattagagccgctttgttggaa
gctgatgtagattacgatgtagcaaaagattttatcaaaaggttaagagagcgtatcttt
tctgaagagataaaaacccacctatcccccacagatatgattataatgagcgtttacgat
gagcttgtaaaaacgcttggtggaaatgcttctcctttagaagaaggggtggtaatgttt
gttggtcttcaaggtactggtaaaactacaacaataggtaagctagcaaatcttatgaag
aaaaacggtagaagtgttatgacagtatctacagacgtaagaagaccagcagccatgctt
caattaaagcgtgtatctgagttagcgggtgtagaatatttagagtttagtccagacaaa
aaccctgttgatatagccaaagaggcgtttgaggcttttaaaagcaaaaaatacgattat
ttgtttttagacaccgctggtaggcttcatatagataacgaactaatggaagagttaaga
gctatcaaagaagccgtaaaaccatctgaggttatatacgtagccgatagcatgcaagga
caagaagctctttctgtagctaaaacttttaacgaagttgtagggcttactggagctatt
cttaccaaaatggatggtgataccagaggtggcgtagcgctttctataaaagatgccata
ggtatccccataaagtatataggtgtgggtgaaaagttagaggatatagatcaattttat
ccagatagaatcgcccaaagaatattaggtcttggtgatttgcaaagtcttatagagaaa
gctgaacaggttattagtgaggatgaggctcaagctataacctataaaatgatgagaggt
gagtttgatctaaatgacttgaagaaaaatataagttttatgatgaacatgggtcctctt
gataaagtgctttcaatgttaccaggagttggttcccagttgaaaaatataaaggttgat
caaaagatatttaaacgtattatagctatggtagattctatgactcctgaggaaagggca
aatccaaacgttataaacttaagtcgtaaacaaagaatagcgaaaggtagcggtaccact
gtttctgatgttaacaagcttttaaaacagtatcaagatatgaaaaagatgattagaaaa
ctaaaaaatcagaaatcaccgtttggtggtttagggctcccgttttaa

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